Rhodopseudomonas palustris HaA2: RPB_2758
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Entry
RPB_2758 CDS
T00321
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPB_2758
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2758
Enzymes [BR:
rpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
RPB_2758
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
RPB_2758
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ABD07460
UniProt:
Q2IWF0
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All DBs
Position
3145271..3146101
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AA seq
276 aa
AA seq
DB search
MAPARIFEPTDNDMRIATWNVNSVRQRLDHLVSWLNECAPDVVCLQEIKCVDEAFPREAI
EALGYNVVTHGQKTFNGVALLSKYPLEEATPRLAGDDDDTHARFLEGVVSLKRGVVRVAC
LYLPNGNPVESEKYPYKLRWMSRLLEYTQQRLKTEEPLILAGDFNVIPQPIDVHNPAGWV
DDALFRPQTRESFQALLGLGLTDALRASTDAPGQYTFWDYQAGAWQKNWGLRIDHLLLSP
QATDRLRNVGIDAYVRNWEKPSDHVPVWADFDLDAA
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagcccggatttttgaaccgacggataacgacatgcggatcgcaacctggaac
gtaaactctgtcaggcagcgactggatcacctggtcagttggctgaacgagtgcgcgccg
gacgtggtgtgcctgcaggagatcaagtgcgtcgacgaggcgtttccgcgcgaggcgatc
gaagcgctcggctacaatgtcgtcacccacggccagaagacgttcaatggcgtcgcattg
ctgtcgaaatatccgctggaggaagccacccctcgcctcgccggcgacgacgatgatact
cacgcccgattcctcgaaggcgttgtgtcgctgaagcgcggcgtggtccgtgtcgcctgc
ctctatctgcctaacgggaatccggtcgagagtgaaaaatatccctacaagctacgctgg
atgtcgcggcttctcgagtacacgcagcagcgcctgaaaaccgaggagccgctgatcctg
gccggcgacttcaacgtgatcccgcaacccatcgacgtccacaacccggccggctgggtc
gatgatgcattgttccggccgcagacgcgggagagtttccaggctctgctcggcctcgga
ctcaccgatgcgctgcgcgcctccaccgacgcgccgggccaatacacattctgggactac
caggccggagcctggcagaagaattggggactgcggatcgaccacctgctgctgtcgccg
caggctaccgaccggctccgcaatgtcggcatcgacgcttacgtgcggaactgggagaag
ccgtccgaccacgtgccggtgtgggcggatttcgatctggatgccgcctga
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