Rhodopseudomonas palustris HaA2: RPB_2876
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Entry
RPB_2876 CDS
T00321
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpb03032
]
RPB_2876
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_2876
Enzymes [BR:
rpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RPB_2876
DNA replication proteins [BR:
rpb03032
]
Prokaryotic type
DNA Topoisomerases
RPB_2876
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPB_2876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-ProteinID:
ABD07578
UniProt:
Q2IW32
LinkDB
All DBs
Position
complement(3272113..3274890)
Genome browser
AA seq
925 aa
AA seq
DB search
MSDKDDEKPGEPQAPSDIRPVSILDEMKRSYLDYAMSVIVARALPDARDGLKPVHRRILF
GMYENGFEWNKPYRKSARTVGDVIGKYHPHGDQSVYDAMVRMAQDFSMRVPLIDGQGNFG
SVDGDAPAAMRYTESRLTKIAQLLLDDLDKDTVDYQDNYDGSFNEPQVLPAKFPNLLVNG
AGGIAVGMATNIPPHNLGEVIDACIALIDDPALSIDDLNVIIPGPDFPTGGIILGRAGIR
LAYHTGRGSIVMRGKVEIETVRKDREAIIISEIPYQVNKATMVERIADLVREKKIEGISD
LRDESDRDGFRVVIELRRDAVPDVVLNQLYRFTPLQTNFGANMVALDAGRPQLMNLKDLL
TLFVAFREQVVTRRTKYLLNKARDRAHILVGLAIAVANIDEIIRVIRNSPDPNTARETLM
SRDWPAADVAAMITLIDDPRHKLNEDGTARLSFEQAKAILDLRLQRLTALGREEIAEELD
KLALEIADYLDILRSRARVQTIVKDELIAVKTEFATPRKTVIIEQEGEVEDEDLIQREDM
VVTVSHAGYVKRVPLSTYRAQRRGGKGRSGMATREEDFVSRLFVASTHTPVLFFSSRGQV
YKEKVWRLPIAPPNGRGKALINILPLEQGERITTIMPLPEDEQSWAALDVMFATTGGNVR
RNKLSDFVDVRRSGIIAMKLDDGEAIVDVQICTERDDVLLTTANGQCIRFPVSDQRDGKE
FGVRVFQGRSSMGVRGIALAPEDKVISLSILRHLDAGSEERAAYLRRANAVRRGGVEERA
AVEDEAAGVEGEDASVGAIELGEQRYVEMSASEQFVLTISENGYGKRTSSFEYRTTNRGG
KGIVAMSVNNRNGKLVASFPVEDSDQIMLVTDNGQLIRCPVEGIRVAGRSTQGVIVFDTA
DDEKVVSVEHIPEAEETENGNGNGG
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgacaaagacgacgagaagcccggggagcctcaggcgccctcggatattcgcccc
gtatccattctcgacgagatgaagcgcagctatctcgattacgcgatgagcgtgatcgtg
gcgcgagcgctgccggatgcgcgcgacggattgaaaccggtgcatcgccggattctcttc
ggcatgtacgagaacggattcgagtggaacaagccgtatcgcaaatcggcgcgcaccgtc
ggcgacgtcatcggtaagtatcacccgcacggcgaccagtcggtgtacgacgcgatggtg
cgcatggcgcaggacttttccatgcgcgtgccgctgatcgacggtcagggcaatttcggc
tcggtcgacggcgacgcgccggccgcgatgcgatacaccgaatcgcgcctgaccaagatc
gcgcaattgctgctcgacgatctcgacaaggacaccgtcgactatcaggacaactacgac
ggctcgttcaacgagccgcaggtgctgccggcgaagttcccgaacctgctggtcaacggc
gccggcggcatcgccgtcggcatggcgaccaacattccgccgcacaatctcggcgaggtg
atcgacgcctgtatcgcattgatcgacgatccggcgctgtcgatcgacgatctgaacgtc
atcatcccgggccccgacttcccgaccggcggcatcattctcggccgcgccggcattcgt
ctcgcctaccacaccggccgcggttcgatcgtgatgcgcggcaaggtcgagatcgaaacg
gtccgcaaggaccgcgaggcgatcatcatctcggagatcccttaccaggtgaacaaggcc
accatggtcgagcggatcgccgatctggtgcgcgagaagaagatcgagggcatctccgat
ctgcgcgatgaatccgaccgcgacggcttccgcgtcgtgatcgagctgcggcgggacgcg
gtgccggacgtggtgctgaaccagctctaccgcttcacgccactgcagaccaatttcggc
gccaacatggtggcgctcgacgccggccgtccgcaactgatgaacctcaaggatctgctg
acgctgttcgtcgcgttccgcgagcaggtggtcacgcggcggaccaaatatctgctgaac
aaggcgcgcgaccgcgctcatattttggtcggcctcgccatcgcggtggcgaatatcgac
gagatcattcgcgtcatccgcaattcgcccgatccgaacacggcgcgcgaaaccctgatg
tcgcgcgactggccggcggccgacgtcgccgcgatgatcacgttgatcgacgacccgcgc
cacaagctcaacgaggacggcaccgcgcggctgtcgttcgagcaggccaaggcgatcctc
gatctgcggctgcagcgcctgacggcgttgggtcgcgaggaaatcgccgaggaactcgac
aagctcgcgctcgagatcgccgactatctcgacatcctgcgttcgcgggcgcgggtgcag
accatcgtcaaggacgaactgatcgcggtgaagacggaattcgccacgccgcgcaagacc
gtgatcatcgagcaggaaggcgaggtcgaagacgaggacctgatccagcgcgaggacatg
gtggtgacggtgtcgcacgccggctacgtcaagcgcgtgccgctgtcgacctatcgggcg
caacgccgcggcggcaagggccgctccggcatggcgacccgcgaggaggatttcgtctcc
aggctgttcgtcgcctcgacgcacacgccggtgctgttcttctcgtcgcgcggccaggtc
tacaaagaaaaggtgtggcggctgccgatcgcgccgccgaacggccgcggcaaggcgctg
atcaacatcctgccgctggagcagggcgagcgcatcaccacgatcatgccgctgccggag
gacgagcagtcctgggccgcgctcgacgtgatgttcgcgaccaccggcggcaatgtccgc
cgcaacaagctgtccgacttcgtcgacgtgcgccgctccggcatcatcgcgatgaagctc
gacgacggcgaggcgatcgtcgacgtgcagatctgcaccgagcgcgacgacgtgttgctg
acaactgccaatggtcagtgcattcgatttcctgtctcggaccaaagagacggcaaggaa
ttcggtgtccgagtcttccaaggtcgttcatccatgggcgtgcgcggcattgctctagcg
cccgaggacaaggtgatctcgcttagcatcctgcgccatctcgacgccggatccgaggag
cgcgccgcctatctgcgccgcgccaatgcggtgcgtcgcggcggcgtcgaggagcgggcg
gcggtggaggacgaggccgcgggggtcgagggcgaggacgcctcggtcggcgcgatcgag
ctcggcgagcagcgctatgtcgagatgtcggcgtccgagcagttcgtgctgacgatctcg
gagaacggctacggcaagcggacctcgtcgttcgagtaccgcacaaccaaccgcggcggc
aaaggcatcgtggcgatgtcggtcaacaaccgcaacggcaagctggtggcgtcgttcccg
gtggaggattcggaccagatcatgctggtgaccgacaacggccagttgatccgctgcccg
gtcgaaggcatccgggtcgctgggcgctcgacccagggcgtgatcgtgttcgacaccgca
gacgacgagaaggtggtgtcggtcgagcacattcccgaggcggaagagaccgagaacgga
aacggtaacggcggctga
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