Rhodopseudomonas palustris HaA2: RPB_3230
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Entry
RPB_3230 CDS
T00321
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rpb
Rhodopseudomonas palustris HaA2
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_8
GAF_2
PAS_3
GGDEF_2
Diguanyl_cycl_sensor
BpsA_C
Motif
Other DBs
NCBI-ProteinID:
ABD07926
UniProt:
Q2IV34
LinkDB
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Position
complement(3691321..3693939)
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AA seq
872 aa
AA seq
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MEVGDSLSADDRDVRLAALERTRDAVVIVDHDGHLRYVNAAAESTFGLDRTGLLGRAVGA
LGHDELGARIVQAAFAAVDPDRPLGQAGFEITIGRQDRRAVRAAVSVSRAQVGSGDYAIA
FVRDITQEVEQREGIAALMTVAERASRAVLVTDRDDIIIYTNPSFTRLFGYSAEETKGRH
AGELLAGRHSNRRTIASPAPDIDDEGSEQQILLYAKDGGEIWVSAEVKGLRDGRGVALLT
DISESVQLRTLQQLTLSALADEIPITELADRMCRFVEKIAPDVVSSLQQIESGLVRPLGG
PGLPDEYSRALDGVAIGPEKGSCGTAAYFGNPVLAIDIDTDPRWQPFKALPLAAGLRACW
SSPIKAKDGRVIGTFAFYFRECRAPSRWHERIVDACVHLGALAIERKEARAQIARLAYYD
MLTGLPNRARLRDLIAQATGTCPPGQHVALAFLDVDNFKDVNDTLGHAAGDDFLVAFAQR
LREQIRPCDMLARLGGDEFVIVMPGRNASEAGLVASRIAEALALPLGIGTWQVPMSASIG
ISLYPDNATDIDVLIRQADTAMYQAKRSGRSTYRFFSEDMNGAAEERMAYSAALRNAITF
DLLELHYQPQIGTRDGAIHGVEALARWNDPVLGAVSPAKFIPLAEECGLIEQVALWSIRA
ACRQMAAWRALGLDIPCVSVNLSPINFQNPNLADLVSDILAELRLPPEVLMLEVTEGVIQ
NERSLAIETMNALRRLGVGLSLDDFGTGYSSLSQLAQLPIRELKIDRGFMRDIAHQSSAR
AVVTAVVRVGQSLQLSVIAEGVETDEQFALLAELGCDAVQGFLYAPALTPAAFELWLVDY
SARRGAAMSKRVAGAPIPALPELRAAAMRRLG
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcggagatagtttgtcggcggacgatcgcgacgtccggctcgccgcgctcgag
cgcacgagggatgccgtggtgatcgtcgatcacgacggtcacctgcgctatgtcaacgcg
gcggcggagtcgacgttcgggctggaccggaccgggctgctcggccgggctgtcggcgcg
ctcggccacgacgagttgggcgcacgcatcgtgcaagcggcgttcgcagcggtcgatccc
gatcgcccgctcggccaagccggtttcgaaatcaccatcggtcgccaggaccgtcgtgcg
gttcgcgccgcggtgtcggtctcgcgggcgcaggtcgggagcggcgattacgccatcgcg
ttcgtccgggacatcacgcaggaagtcgaacagcgcgaggggattgcggcgctgatgacg
gtcgccgaacgcgccagccgcgccgtcctcgtcacggatcgcgacgatatcatcatctat
accaacccgagcttcacgcgtctgttcggatactccgccgaggagacgaagggccggcac
gccggtgaattgctcgcgggccgccattcgaaccgccggacgatcgcgagcccggcgccc
gacatcgacgacgagggcagcgagcaacagatcctgctctacgccaaggacggcggcgag
atctgggtctccgccgaggtcaagggactgcgcgacgggcgaggggtcgcgttgctgacc
gacatctcggaatccgtgcagttgcggacgctgcagcaactgacgctgagcgcactggcc
gatgaaatcccgatcaccgagctcgcggaccggatgtgcaggttcgtcgagaagatcgcg
ccggacgtggtgtcctcgctgcagcagatcgagtccgggttggttcgcccgctcggcggc
ccgggccttcccgacgaatactcccgcgctctggacggcgtcgcgatcggtccggagaag
gggtcttgcgggaccgcagcctatttcggcaatccggtcttggcgatcgacatcgacacg
gatccgcgctggcagccgttcaaggcgctgccgctcgccgccggtctgcgcgcctgctgg
tcgtcgccgatcaaggccaaggacggccgcgtgatcggcaccttcgcgttctatttcagg
gaatgccgcgcgcccagccgctggcacgagcggatcgtcgacgcttgcgtgcatctcggc
gcgcttgcgatcgagcgcaaggaagcgcgcgcccagatcgcgcggctcgcttattacgac
atgctgacgggcctgccgaaccgcgcgcgcctgcgcgatctgatcgcccaggcgaccggg
acctgtccgccgggacagcacgtcgcgctggcgttcctcgacgtcgacaatttcaaggac
gtcaacgacacgctcggccatgccgccggcgacgatttcctggtggcgttcgcacagcgt
ctgcgcgagcagattcggccgtgcgacatgctggcgaggctcggcggcgacgagttcgtg
atcgtgatgccgggacgcaacgcatcggaagccgggctcgtcgcgtcgcgaattgccgag
gccctggcgttgccgctcgggatcggaacctggcaggtgccgatgtccgccagcatcggc
atcagcctgtatccggacaacgccaccgacatcgatgtgttgatcaggcaggccgacacg
gcgatgtaccaggccaagcgcagcggccgttcgacctatcgcttcttcagcgaagacatg
aacggcgcggccgaggaacggatggcctacagcgcggcgttgcgcaacgccatcacgttc
gatttgctcgagctgcactatcagccgcagatcgggacccgcgacggcgccatccacggc
gtcgaggcgctggcgcgctggaacgatcccgtgctcggcgcggtgtcgccggcgaagttc
attccgctggccgaagagtgcgggctgatcgaacaggtcgcgctgtggtcgatccgcgcc
gcttgccggcagatggcggcgtggcgcgcgctggggctcgatattccttgcgtctccgtc
aacctgtcgccgatcaatttccagaatccgaatctggccgatttggtgtcggatattctc
gccgagctccgcctgccgccggaggtgctgatgctcgaagtgaccgagggcgtgatccag
aacgaacgttcgctggcgatcgagaccatgaacgcgctgcgcaggctcggtgtcggattg
tcgctcgatgatttcggcaccggctattccagtctcagccagcttgcgcaactgccgatc
cgcgaattgaagatcgaccgcggcttcatgcgcgacatcgcgcaccagtccagcgcgcgg
gcggtggtgaccgcggtggttcgggtcggccagagcctgcaactcagcgtgatcgccgaa
ggcgtggaaaccgacgagcaattcgccttgctggcggaactgggatgcgatgccgtccag
ggattcctctacgccccggcgctgacgccggcggccttcgaactctggctggtcgactac
agtgcccggcgaggcgcggcgatgtcgaagcgcgtcgccggcgcgccgatcccggcattg
cccgagcttcgcgccgccgccatgcggcggctgggttag
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