Rhodopseudomonas palustris HaA2: RPB_3261
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Entry
RPB_3261 CDS
T00321
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb00061
Fatty acid biosynthesis
rpb00071
Fatty acid degradation
rpb01100
Metabolic pathways
rpb01212
Fatty acid metabolism
rpb02024
Quorum sensing
rpb04146
Peroxisome
Module
rpb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPB_3261
00071 Fatty acid degradation
RPB_3261
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPB_3261
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPB_3261
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpb01004
]
RPB_3261
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpb04147
]
RPB_3261
Enzymes [BR:
rpb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPB_3261
Lipid biosynthesis proteins [BR:
rpb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPB_3261
Exosome [BR:
rpb04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPB_3261
Exosomal proteins of breast cancer cells
RPB_3261
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABD07957
UniProt:
Q2IV03
LinkDB
All DBs
Position
complement(3730443..3732047)
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AA seq
534 aa
AA seq
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MINLEATGGVPGPGRIGRVAIGDILRKSALRFPARIALTEGARQVSYTELERDANRFANY
LVSRGLKPGDKISTICNNSVEFVKALFGIHRAGLVWVPINTMLGPDDMSYILDHAGVKFA
LIDDNLHGQPERRAALESRGIALVAVDLTGKAKEAGLRSFNELIDGHSEIEPEVAFDDRD
LAMIIYTSGTTSRPKGAMHCHLAVTMAVMSNAIELQLTRNDGITGQFPLFHCAAHVLLLS
YLAVGGKMALMRGFDPVACLEAIQRDKLTVFIGLPLMYQVILDHPRRKEFDLSTLRCCIY
TMAPMPRPLLERAIAELCPNFVQPSGQTEMYPATTMSQPDRQLARFGNYWGESCMVNETA
IMDDAGNLLPPGEVGELVHRGPNVMLGYYKDPEATEAARKFGWHHTGDLALIDTHGEVLF
VDRKKDMIKSGGENVASVKIEETLLAHPAVMNAAVVGLPHPQWGEAVSGFVKLKPGAQAT
ETEIIEHCRKTLGGFQVPKLVRIVDEMPMTATGKLRKVELRNQFTDYFAMAQTG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatctagaagccaccggcggcgtgccgggaccgggccggatcggccgggtcgcg
atcggcgacatcctgcgcaaatcggcgctgcgctttccggcgcggatcgcgctgaccgag
ggcgcgcgtcaggtcagctacaccgagctcgaacgcgacgccaaccgcttcgccaactat
ctggtgtcgcgcggactgaagcccggcgacaagatctcgacgatctgcaacaactcggtc
gaattcgtcaaagcgctgttcggcattcatcgcgccgggctggtctgggtgccgatcaac
accatgctcggccccgacgacatgagctacatcctcgatcatgccggggtgaagttcgcg
ctgatcgacgacaatctgcacggccagcccgagcgccgcgccgcgctggagagccgcggc
atcgcgctggtggcggtcgacctcaccggcaaggcgaaagaagccggcctgcggagcttc
aacgagctgatcgacggacactccgagatcgagccggaggtcgcgttcgacgatcgcgat
ctggcgatgatcatctacacgtccggcaccacctcgcggccgaagggggcgatgcattgc
cacctcgcggtgacgatggcggtgatgagcaacgcgatcgagctgcagctcacccgcaac
gacggcatcaccgggcagtttccgctgttccactgcgccgcccatgtgctgctgctgagc
tatctcgccgtcggcggcaagatggcgctgatgcgcggcttcgacccggtcgcctgcctg
gaagcaatccagcgcgacaagctcaccgtcttcatcggcctgccgctgatgtatcaggtg
atcctcgatcatccgcggcgcaaggaattcgacctgtcgacgctgcgctgctgcatctac
actatggcgccgatgccgcggccgctgctggagcgcgcgattgccgagctgtgtccgaat
ttcgtccagccgtccgggcagaccgaaatgtatccggcgacgacgatgtcgcagccggac
cgccagctcgctcgtttcggcaattactggggcgaatcgtgcatggtcaacgagaccgcg
atcatggacgatgccggaaacctgctgccgccgggtgaagtcggcgagctggtgcatcgc
ggccccaacgtcatgctcggctactacaaggatcccgaggccaccgaggcggcgcgcaaa
ttcggctggcaccacaccggcgatctggcgctgatcgacacccacggcgaggtgctgttc
gtcgaccgcaagaaggacatgatcaaatccggcggcgagaacgtcgcctcggtcaagatc
gaggagacgctgctggcgcatccggcggtgatgaacgccgcggtggtcggcctgccgcat
ccgcaatggggcgaggcggtgtcgggcttcgtcaagctcaagccgggggctcaagcgacc
gagaccgagatcatcgagcactgccgcaagacgctcggcggcttccaggtgccgaagctg
gtgcgcatcgtcgacgagatgccgatgaccgccaccggcaagctgcgcaaggtcgagctg
cgaaaccagttcacggactacttcgcgatggcgcagacggggtga
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