Rhodopseudomonas palustris HaA2: RPB_3845
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Entry
RPB_3845 CDS
T00321
Name
(GenBank) conserved hypothetical protein
Organism
rpb
Rhodopseudomonas palustris HaA2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Apolipoprotein
Nbl1_Borealin_N
Phasin
DUF3710
Motif
Other DBs
NCBI-ProteinID:
ABD08538
UniProt:
Q2ITC2
LinkDB
All DBs
Position
4390822..4396767
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AA seq
1981 aa
AA seq
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MALSAIQEALNISDAPAATDDPISARSDNSPALSPPPAFNDGAPEPRIATDRPGFEQHDD
DRQFAQRPANDDRETIGQLLQALQKGRPARNVYTLASIFAGVWIFGGIVLTISFLPSLQA
MVGQGAGGTMALVGLIALFLAPVMLFYFLASLTWRGQELRMIAQSMAQVAIRFSEPEIAA
SDSVVTVGQAIRREVAAMGDGVERAIARAGELETLVANEVSALERAYSDNEVRIRALLQD
IAHQRDNLVGQAEQVRSAISGVQIDLRHDIALISDAIASRVDEVAKSITSALEERGAHIT
GALSHAGDNMILALGERGGDLLDRLEEASAETTRAVLDASERLTASLNFKTGHVHDEFVE
LADRVHDMLNERLDRITGEFEQRSSSIVDGISERTEQVHDSLKNSSDSLLLELELRSGDL
VSKIDDAGNRLADQILTSGDKASEALDVTVNTLVAKVVSQTENAHDALSMQMSAFDDLVK
QQGSELAEKFARDSGTLGALITRHISEFDRTVKTYGGDIVERMGQRTQDISTTLKDYVDN
FDQRVTARGGELSATLDQRLSHFENVFETRVGSLDGSLDVKIKLLDETVSEHLRSLEDGF
ASRTQIVTESIDSRIARLSETLTTGSDQAIVAIDSRIAELSTTMSSGTSQAVDLIDTRID
KLSGTLTAGAVQAIEAIDQRLSHLTNSLTDGTAQAIHAIDQRIGNVTETIDSRSAGLAAT
VSARFQEIHEGLEGRVGTVLTDIDLRVSQFEDLLGSRIDAVAGRFENTGREASDLLMARA
EELSLGIKSHVADAERSLTGLVVSTSDTIQSGTRSAKEAMLSVSTEVGAQLQLTSSEIER
ALTAVGTSAANTVLLSATEAQSKLVAASSDTLAQIKSLSADVERTLAVAGTSTAASVLAG
AREAQTTLVATSTDVTNEIRSLSAEIQRTLTDVGGTASTSVLNSAREAQATLVSSSSDVA
SQIRALSADIERTLTGAGDATSASVLAGAREAQSTLLSASTEVTGQIRSLSSDIERTLYA
AGNATAESVLGGARAAQTTLVAASEEAAERVKSLSSDVQRTLSEAGSATASAIVAGAREA
QNTLVAASSEASSQVISLASDVERKLTAAGSATVETLLSGAREAQHTLVATSTETSNQLK
ALTGDVERTLTTAGSATAGAILASARDVQSTLANASTAASDQARSLAAEVERSLITAGKT
SAESIVTGAREAQTTLMTASEEAANHVKSLAIDVERTLTTVSAAAASTILGSARDVQSTL
TNGSAEAASQIKAISADIERTLAGVTINTTDNIQVSAAAAQSTLVAVSNEVSSKIKSTSA
EIERSVFAASGSFGSTITAKSDEIVSYVQQQAERLSQIIDGKRGLLVEAISGKTNQLTIE
IDRVTTDALGAIESRGKAFSNSILTNGNDVARSITGAGDLATGAINKSLKDLELASRSAI
EQSRQVSVTAVTEMQETSKILRTDTVALFERLREGNILLQEVLTGAHENLNSLERALVTR
VADFVTTMNDVNARSGAATQGLEDQLTGFHGKTAKALADLSALSEQFEMHGQALAEAAEL
VQQSNRSASTSVLERKESLESLVTTIDLRTADLDQRLTRFTGLLDESLAAAEERARDIAR
IVAETAGAGSASITQQFEAVRSAAEQERRLTTEAMHQVYQQGTQEADALFKQSADRFAAI
VQGIKQMASEMHHELEATREELRRGVLEIPQEAAESTAQMRKVIVDQIEALAELNRIVAR
HGRGMDVVGTTRASAVRDEEPMLATAGGRGEAIARAPEPMSRPEPVSREPASRPAQRREA
SAATLPPPDLGLPGPAPRRTEAPPVAPTGADPGRDGWLSDLLNRTDAGAERELPRARTPQ
QPTPQQAMSGNPLESLSLDIGRLMDRNLVLEMWDRYQRGEAKAFSKRLYTPAGQKAFDEV
ARKYRSDRAFKQTVDRYITEFERLLDEVARDERGPQVLRTHLSSETGLVYTLLAHAAGRL
G
NT seq
5946 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctgtccgcgattcaggaagccctgaacatcagcgatgcgcctgcggcgaccgac
gatccgatctcggcgcggagcgacaattcgccggcgctctcgccgccgcccgctttcaac
gacggcgcgccggagccgcggatcgcaaccgaccgtcccggattcgaacaacacgacgac
gaccgtcagttcgcgcagcgccccgccaatgacgaccgcgagaccatcggccagttgctg
caggcgctgcagaagggccgtccggcccgcaacgtctacaccctcgcctcgatcttcgcc
ggggtctggatcttcggcggcatcgtcctcaccatcagcttcctgccctcgctgcaggcg
atggtcggccagggcgccggcggcacgatggcgctggtcggcctgatcgcgctgttcctc
gccccggtgatgctgttctacttcctcgccagcctgacctggcgcggccaggaactgcgg
atgatcgcgcagtcgatggcgcaggtcgcgatccgattctcggagcccgagatcgcggcg
agcgattccgtcgtgaccgtcggtcaggcgatccgccgcgaggtcgcggcgatgggcgac
ggcgtcgagcgcgcgatcgcgcgcgccggcgagctcgagaccctggtcgccaacgaggtc
tcggcgctggaacgcgcttactccgacaacgaagtccgcatccgcgccctgctgcaggac
atcgcgcatcagcgcgacaatctggtcggccaggccgagcaggtgcgtagcgccatctcc
ggcgtgcagatcgatctgcgccacgacatcgcgctgatctccgacgcgatcgccagccgc
gtcgacgaagttgcgaagagcatcaccagcgcgctggaagagcgcggcgcccacatcacc
ggtgcgctgagccacgccggcgacaacatgatcctcgccctcggcgagcgcggcggcgat
ctgctcgaccgcctggaagaagccagcgccgagaccacgcgcgccgtgctcgacgccagc
gagcggctgaccgccagcctgaatttcaagaccgggcacgttcacgacgaattcgtcgaa
ctcgccgaccgcgtccacgacatgctcaacgagcggctcgatcgcatcaccggcgagttc
gaacagcgttcgtccagcatcgtcgacggcatttccgagcgcaccgagcaggtccacgac
tcgctgaagaactcctcggactcgctgctgctcgaactcgagctgcgcagcggtgatctc
gtcagcaagatcgacgacgccggcaaccgcctcgcagaccagatcctgaccagcggcgac
aaggccagcgaagcgctcgacgtcaccgtgaatacgctggtggccaaggtcgtcagccag
accgagaacgcccacgacgccctcagcatgcagatgagcgcgttcgacgatctggtgaag
cagcagggctccgagctcgccgagaagttcgcgcgcgattcgggcacgctcggcgcgctg
atcacccgccacatctccgaattcgaccgcaccgtgaagacctacggcggcgacatcgtc
gagcgcatgggccagcgtacccaggacatctcgaccacgctgaaggactacgtcgacaat
ttcgaccagcgcgtcaccgcgcgcggcggcgagctcagcgccacgctggatcagcgcctg
tcgcatttcgagaacgtgttcgagacccgcgtcggcagcctcgacggctcgctcgacgtc
aagatcaagttgctggacgaaaccgtcagcgaacacctgcgctcgctcgaagacggcttc
gcatcgcgcacccagatcgtcaccgaatcgatcgacagccggatcgcgcggctctcggaa
acgctgaccaccggctcggatcaggcgatcgtcgccatcgacagccggatcgccgaactg
tcgaccacgatgtcgagcggcacgagccaggccgtcgatctgatcgacacccgcatcgac
aagctctccggcacgctgacggcgggcgcggtgcaggcgatcgaggcaatcgatcagcgc
ctgtcgcatctcaccaactcgctcaccgacggcaccgcgcaggcgatccacgcgatcgat
cagcgcatcggcaacgtcaccgagacgatcgacagccgcagcgccggactggcggcgacc
gtcagcgcccgcttccaggagatccacgaaggcctcgaaggccgggtcggcaccgtgctg
accgacatcgacctgcgcgtgtcgcaattcgaggacctgctcggctcgcgcatcgacgcg
gtggccggtcgattcgagaacaccgggcgcgaagccagcgatctgctgatggcgcgcgcc
gaagaactctcgctcggcatcaagtcgcatgtcgccgacgccgagcgttcgctcaccggc
ctcgtcgtcagcaccagcgacacgatccagagcggcacccgctccgccaaggaagcgatg
ctgtcggtgtcgaccgaggtcggcgcgcagctgcaactcacctcgtccgagatcgaacgc
gccctcaccgcggtcggcaccagcgccgcgaacacggtgctgctcagcgcgaccgaggcc
cagtccaagctggtcgcagcgtcgagcgatacgctcgcccagatcaagtcgctgtcggcc
gacgtcgagcgcaccctcgcggtcgccggcacctcgaccgcggcatcggtgctggccggc
gcgcgcgaggcgcagaccacgctggtcgccacctcgaccgacgtcaccaacgagatcagg
tcgctgtcggccgaaatccagcgcacgctgaccgacgtcggcggcaccgcctcgacctcg
gtgctgaacagcgcccgcgaggcgcaggcgaccctggtgtcgtcgtcgtccgacgtcgcc
agccagatccgcgcgctgtccgccgatatcgagcgcaccctgaccggagccggcgacgcc
acctcggcatcggtgctggccggcgcccgcgaggcgcagtcgaccctgctgtcggcctcc
accgaggtcaccggccagatccggtcgctgtcgtcggatatcgaacgcacgctgtacgcc
gccggcaatgccactgcggagtccgtgctcggcggcgcccgcgccgcccagaccacgctg
gtggcagcctccgaagaggccgcggagcgcgtcaagtcgctgagctccgacgttcagcgc
acgctgtccgaagccggatccgcgaccgccagcgcgatcgtcgccggcgcgcgcgaagcc
cagaacacgctggtcgccgcctcctccgaggcgtcgagccaggtgatctcgctcgccagc
gatgtcgaacgcaagctgacggcggccggtagcgccaccgtggagaccctgctgtccggc
gcccgcgaagcccagcacaccctggtggcgacctcgaccgagacgtcgaaccagctcaag
gcgctgaccggcgacgtcgagcgcaccctgaccaccgccggcagcgccaccgccggcgcc
attctcgccagcgcccgggacgtccagagcacgctcgccaacgcttcgaccgcggcctcc
gatcaggcccgctcgctcgccgcagaggtcgaacgcagcctgatcaccgccggcaagacc
tccgccgaatcgatcgtcaccggcgcgcgcgaagcgcagaccacgctgatgacagcctcg
gaggaagccgccaaccacgtcaagtcgctggcgatcgacgtcgagcgcacgctgaccacg
gtcagcgccgcggcggcgtcgaccattctgggcagcgcccgcgacgtgcagtcgaccctc
accaacggctcggcggaagcggcgagccagatcaaggcgatctccgccgacatcgagcgc
acgctcgccggcgtcaccatcaacaccaccgacaacatccaggtcagcgcggcggcggcc
cagagcacgctggtcgcggtgtcgaacgaggtcagctcgaagatcaagtcgacttccgcg
gagatcgaacgctcggtgttcgccgccagcggcagcttcggctcgaccatcaccgccaag
agcgacgagatcgtcagctacgttcagcagcaggccgagcgcctgtcgcagatcatcgac
ggcaagcgcggcctgctggtggaagccatctccggcaagaccaaccagctcaccatcgag
atcgaccgcgtcaccaccgacgcgctcggcgccatcgaaagccgcggcaaggcgttctcg
aattcgatcctgaccaacggcaacgacgtcgcgcgctcgatcaccggcgccggcgatctc
gccaccggcgcgatcaacaagtcgctcaaggatctcgagctcgcctcgcgctccgcgatc
gaacagtcgcgccaggtctcggtcaccgccgtcaccgagatgcaggagaccagcaagatc
ctgcgcaccgacacggtcgctttgttcgagcggctgcgcgaaggcaacatcctgctgcag
gaagtgctcaccggcgcccacgagaacctcaactcgctggagcgcgcgctggtcacccgc
gtggcggatttcgtcaccaccatgaacgacgtcaacgcccgcagcggcgccgccacgcag
ggcctggaagaccagctcaccggcttccacggcaagaccgccaaggcgctggccgatctc
agcgcgttgtccgagcagttcgagatgcacggtcaggccctggccgaagccgcggagctg
gtccagcagagcaaccgtagcgcatcgacctcggtgctggagcgcaaggaatcgctggag
tcgctggtcaccaccatcgacctgcgcaccgccgatctcgaccagcggctcacccgcttc
accggcctgctcgacgaatcgctcgccgcggctgaggagcgcgcccgcgacatcgcgcgg
atcgtcgccgagaccgcaggcgccggctccgccagcatcacgcagcagttcgaagcggtg
cgcagcgccgccgagcaggagcgccgcctcaccaccgaggcgatgcaccaggtctatcag
cagggcacccaggaagccgatgcgctgttcaagcaatcggccgaccgcttcgcggcgatc
gtccaggggatcaagcagatggcttcggagatgcaccacgaactcgaagccacccgcgag
gagctgcgacgcggcgtgctcgaaatcccgcaggaggccgccgagagcaccgcgcagatg
cgcaaggtgatcgtcgaccagatcgaggcgctggccgaactcaaccgcatcgtcgcgcgc
cacggccgcggcatggatgtggtcggtaccacccgcgccagcgcggtccgcgacgaagag
ccgatgctggcgaccgccggcggccgcggcgaggccatcgcgcgcgcgccggagccgatg
tcacggccggagccggtgtcgcgtgaacccgcgtcgcggccggcacagcgccgcgaggcc
agcgccgcaacgctgccgccgccggacctcggcctgccgggccctgccccgcgccgcacc
gaggccccgccggtcgcgccgaccggcgccgatccgggccgcgacggctggctgtcggat
ctcctcaaccgcaccgacgccggtgccgagcgcgaacttccgcgcgcccggacgccgcag
cagcccacgccgcagcaggcgatgagcggcaatccgctggaatcgctgtcgctcgacatc
ggccggctgatggaccgcaacctggtgctggagatgtgggatcgctatcagcgcggcgag
gccaaggcgttcagcaagcggctgtacacgccggccggccagaaggcgttcgacgaggtc
gcccgcaagtatcgcagcgaccgcgccttcaagcagacggtggaccgctacatcaccgag
ttcgaacgcctgctcgacgaagtcgcccgcgacgaacgcggcccgcaggtgctgcgcacg
catctgagctcggaaacgggcctcgtgtacacgctgctggcgcatgcggcggggcggctg
gggtaa
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