Rhodopseudomonas palustris HaA2: RPB_4459
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Entry
RPB_4459 CDS
T00321
Name
(GenBank) Exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
rpb
Rhodopseudomonas palustris HaA2
Pathway
rpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RPB_4459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpb03400
]
RPB_4459
Enzymes [BR:
rpb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RPB_4459
DNA repair and recombination proteins [BR:
rpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RPB_4459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
SKA2
GIDA_C_1st
Motif
Other DBs
NCBI-ProteinID:
ABD09142
UniProt:
Q2IRL8
LinkDB
All DBs
Position
5048004..5048255
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AA seq
83 aa
AA seq
DB search
MADAAPADVKKLSFERAMEELETIVKRLEDGKVPLEESVAIYERGEALKRRCEELLRQAE
ARVDKITTDAQGQPVGTEPLDVQ
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccgcccccgccgatgtcaagaagctgagcttcgagcgcgcgatggaggaa
ctcgaaaccatcgtcaagcggctcgaggacggcaaggttccgctggaggagtcggtcgcg
atctacgagcgcggcgaggcgctgaagcggcgctgcgaggaactgctgcgccaggccgag
gcccgcgtggacaagattaccaccgatgcccaggggcagccggtcggaaccgagccgctc
gacgtccagtag
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