Rhodopseudomonas palustris BisB18: RPC_0003
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Entry
RPC_0003 CDS
T00336
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RPC_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_0003
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RPC_0003
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_21
AAA_15
AAA_23
ABC_tran
AAA_27
AAA_29
AAA_30
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
ABD85582
UniProt:
Q21DF4
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Position
3768..4907
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AA seq
379 aa
AA seq
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MTVSKIHRLTLTHFRNYRAASVTVRGDVVVLVGPNGAGKTNCLEAISLLSPGRGLRRATL
DDIADNHGDGSWAVSAEVEGALGLATLGTGIDPRTEAAATTRRCRIDRENVGSAAAFGDH
LRMVWLTPAMDGLFLGAASERRRFFDRLVLAIDSQHSSRVSALDRSLRSRNRLLEQRSHD
SHWLDAIERETAELAVAVAAMRGETVTRLAAALAQRSADSAFPSATIALDGWMENALRSE
PATAVEDRYRTSLRDNRARDAAAGRTLDGPHLTDLRVIYTPKNMPARDASTGEQKALLIG
LVLAHAYLVAEMTGITPLLLLDEVVAHLDPSRRKALFGELARLGAQVWMTGADPAAFVDL
GEGGELFEVDNGRIAPHGG
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtctcaaagatccatcgcctgacgctgacgcatttccgcaattatcgcgcggcg
agcgtgacggtgcgcggcgacgtcgtggtgctggtggggccgaacggcgctggcaagacc
aattgcctggaggcgatctcgctgttgtcgccgggccgcggcttgcgccgcgccacgctc
gacgacatcgccgacaaccatggcgatggctcctgggcggtctccgccgaagtcgaaggc
gcgctcggcctcgccacgctcggcaccggcatcgatccgcgcaccgaggccgccgcgacc
acaaggcgctgccggatcgaccgcgagaatgtcggctcggcggcggcgttcggcgatcat
ctgcggatggtgtggctgacgccggcgatggacgggctgtttctcggcgcggcctccgag
cggcggcggttcttcgaccggctggtgctggcgatcgacagccagcattcctcgcgcgtt
tccgcactcgaccgcagcctgcgttcgcgcaaccggctgctggagcagcgcagccacgat
agccactggctggatgcgatcgagcgcgaaaccgccgaactcgcggtcgcggtggcggca
atgcgcggcgagaccgtgacccggctcgccgcggccctggcgcaacgcagcgccgactcg
gcgtttccgtcggcgaccatcgcgctcgacggctggatggaaaacgcgcttcgttccgag
cccgccaccgcggtggaagaccgctatcgcacctcattgcgcgacaaccgcgcgcgcgac
gccgccgccggacgcaccttggacggtccgcatctcaccgatctgcgggtgatctacacg
ccgaagaacatgccggcgcgggacgcctccaccggcgaacagaaggcgctgctgatcggc
ctggtgctggcgcacgcttacctggtcgccgagatgaccggcatcacgccgctgttgcta
ctcgacgaggtggtggcgcatctcgatccgtctcgccgcaaggcgctgttcggcgaattg
gcgcgactcggcgcgcaggtctggatgaccggcgccgaccccgcggcgttcgtcgatctc
ggcgaaggcggcgagctgttcgaggtcgataacggccgcatcgcgccgcacggcggttag
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