Rhodopseudomonas palustris BisB18: RPC_0179
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Entry
RPC_0179 CDS
T00336
Name
(GenBank) replication restart DNA helicase PriA
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RPC_0179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_0179
Enzymes [BR:
rpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPC_0179
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RPC_0179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
ETF
TrwB_AAD_bind
AAA_30
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABD85754
UniProt:
Q21CY2
LinkDB
All DBs
Position
complement(195702..197906)
Genome browser
AA seq
734 aa
AA seq
DB search
MDHSTRSSSSSATRVVDVLLPVALDQAYSYRVPRGVELAPGDVVCVPLGAREVIGVVWAD
NPNPDPRLHNRLKDVDSKLDVPRFREELRRLVDWVANYTLSPRGQVLRMTLRMGEHLGPE
RVRLGVRLVGPKPQRMTPARARLIEILSDGLLHGKSDAIKEAGCSPGVVDGLVDEGTLKV
EPMARALAPPAPDPDFAQPDFSPEQTTAADSLRALAAGGAFKVALLDGVTGSGKTEVYFE
AVAEIIRRGEQTLILMPEIALTGQFLDRFAQRFGVRPLEWHSELTPRTRARNWAAIAAGE
AQVVVGARSALFLPYAKLGLIIVDEEHDQAYKQDEGAHYHARDMAVVRASIAKIPIILAS
ATPSVESEVNARKGRYQRVALPSRFGGQHMPQIEAIDLRREGPMRGRYIAPRLAEQIGIA
IERREQALLFLNRRGYAPLTLCRACGHRFACTICDAWLVDHRFRQRLVCHHCGFSMPRPK
LCPHCNAEESLVAVGPGVERLQEEAQKLFPDARTMVLSSDLVTSIESMRSELTEIAEGRV
DIIIGTQLVAKGHNFPRLNLVGVIDADLGLGNGDPRAAERTYQLLNQVIGRAGRDQGYGI
GYLQTHQPEHPVMKALVACDREAFYESEIDARERTGYPPFGRLASLIVSAGDRPTAEGFA
RKLVAMSPLDERIKVLGPAEAPLAVIKGRYRFRILVKSARGVDLSSYLRQWLALGPKTTG
NLNLEVDVDPQSFL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaccattccacgcgctcctccagttcctcggcgacccgcgtggtcgacgtgctgctg
ccggttgcgctcgatcaggcttattcctaccgggtgccgcgcggggtggagcttgcgccg
ggcgacgtggtctgcgtgccgctcggcgcccgcgaggtgatcggcgtggtctgggccgac
aaccccaaccccgatccccggctgcataaccggctgaaggacgtcgactccaagctggat
gtgccgcggtttcgcgaggaattgcgccggctggtcgactgggtggcgaattacacgctg
tcgccgcgcggccaggtgctacggatgacgctgcggatgggcgagcatctcggcccggag
cgggtgcggctcggcgtgcggctggtcggaccaaagccgcagcggatgacgccggcgcgg
gcgcggctgatcgagattctgtccgacgggctgttgcacggcaaatccgacgcgatcaaa
gaggccggctgctcgcctggcgtggtcgacgggctggtcgacgagggcacgctcaaggtc
gagccgatggcccgcgcgctggcgccgcccgcgccggacccggatttcgcgcagccggat
ttttcgcctgagcaaaccacggcggccgacagcctgcgggcgttggcggccggcggcgcg
ttcaaggtggcgctgctcgatggcgtcaccggctccggcaagacagaagtgtatttcgag
gcggtcgccgagatcatccgccgcggcgagcagaccttgatcctgatgcccgaaatcgcg
ctgaccgggcagtttctcgaccgcttcgcgcaacgcttcggggtgcgtccgctggaatgg
cactccgaattgaccccgcgcacccgcgcccgcaactgggcggcgatcgccgccggcgag
gcgcaggtggtggtcggcgcccgctcggcgctgttcctgccttatgccaagctcgggctg
atcatcgtcgatgaggagcacgaccaggcctacaagcaggacgagggcgcgcattaccac
gcccgcgacatggcggtggtgcgcgcgagcatcgccaaaatcccgatcattctcgcctcg
gcgacgccgtcggtggagagcgaggtcaacgcccgcaaaggccgctaccagcgtgtcgcg
ctgccgtcgcggttcggcggccagcacatgccgcagatcgaggccatcgatctgcgccgc
gaagggccgatgcgcggccgctatatcgccccaaggctggccgagcagatcggcatcgct
atcgagcgccgcgaacaggcgctattattcctcaaccgccgcggctatgcgccgctgacg
ctgtgccgggcctgcggccaccgcttcgcctgcacgatctgcgacgcctggctggtcgac
caccgttttcgccaacgcctggtttgccaccattgcggcttctcgatgccgcggccaaaa
ctctgcccacactgcaacgccgaagaatctttagtcgcagtcggccccggcgtggagcgg
ctgcaggaggaggcgcagaagctgtttcccgacgcccgcaccatggtgctgtcgagcgat
ctcgtcacctcgatcgaatcgatgcgctcggaattgaccgagatcgccgagggccgcgtc
gacatcatcatcggcacccaattggtcgccaaggggcacaatttcccgagacttaatctg
gtgggcgtgatcgacgccgatctcgggctcggcaacggcgatccgcgcgccgccgagcgc
acctatcaattgctcaatcaggtgatcggccgcgccggccgcgaccagggctatggcata
ggctatctgcagacccaccagccggagcatccggtgatgaaggcgctggtcgcctgcgac
cgcgaggcgttttacgaaagcgaaatcgacgcccgcgagcgcaccggctacccgccgttc
gggcggctcgccagcctgatcgtctcggccggcgatcggccgaccgccgaggggtttgcg
cgcaaattggtggcgatgtcgccgctagatgagcggatcaaggtgctgggaccggcggag
gcgccgttggcggtgatcaagggccgctatcgattccgcatcctggtgaagtcggcgcga
ggcgtcgacctgtcgagctatctgcggcagtggctggcgctggggccgaagaccaccggc
aatctcaatctcgaagtcgacgtcgatccgcagagctttttgtag
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