KEGG   Rhodopseudomonas palustris BisB18: RPC_0196
Entry
RPC_0196          CDS       T00336                                 
Name
(GenBank) 2',5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
rpc  Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rpc03016]
    RPC_0196
Enzymes [BR:rpc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     RPC_0196
Transfer RNA biogenesis [BR:rpc03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    RPC_0196
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: ABD85771
UniProt: Q21CW5
LinkDB
Position
complement(214210..214746)
AA seq 178 aa
MPRLFTGLEIPAEIGQTLSNLRGGLPGARWINPENYHVTLRFIGDIDGVSANEIASMLVR
INRKPFDVAVQGLQSFGGKKPRAVVASVVPSRPLIELQAELERLMQRLGLNPEGRKFTPH
VTLARLRDASNQDVADYLSVRGYFPTRVFTASRFVLFSSRASTGGGPYVVEDSYALSA
NT seq 537 nt   +upstreamnt  +downstreamnt
atgccgcgtttattcactggactggaaattccggccgagatcggccagacgctctccaat
ctgcgcggcgggctgcccggcgcacgctggatcaacccggaaaattaccacgtcaccctg
cgcttcatcggcgacatcgacggcgtctcggccaacgagatcgcctcgatgctggtgcgg
atcaaccgcaagccgttcgacgtcgcggttcaggggctgcaaagcttcggcggcaagaag
ccgcgcgcggtggtggcttcggtggtgccgtcgcggccgctgatcgagctccaggccgaa
ttggagcggctgatgcagcggctcgggctcaaccctgaggggcgcaaattcaccccgcac
gtcacgctggcgcggctgcgcgacgcctccaaccaggacgtcgcggattatctgtcggtg
cgcggctatttcccgaccagggtgttcaccgcctcgcgcttcgtgctgttctcgtcgcgg
gcctccaccggcggcgggccttacgtggtggaggattcttacgcgctgagcgcataa

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