Rhodopseudomonas palustris BisB18: RPC_0297
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Entry
RPC_0297 CDS
T00336
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc03030
DNA replication
rpc03430
Mismatch repair
rpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPC_0297
03430 Mismatch repair
RPC_0297
03440 Homologous recombination
RPC_0297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpc03032
]
RPC_0297
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_0297
Enzymes [BR:
rpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPC_0297
DNA replication proteins [BR:
rpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPC_0297
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPC_0297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABD85872
UniProt:
Q21CL4
LinkDB
All DBs
Position
319546..320241
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AA seq
231 aa
AA seq
DB search
MREIVLDTETTGLDPLRGDRLVEIGCVEIFNRMPTGQTFHRYINPERDMPQEAFAVHGLS
AEFLSTKPLFAEVVDEFLEFIAEAPLVIHNASFDIGFINAELGKIARPPIPRDRLVDTLL
LARRKHPGVSNRLDDLCSRYAIDNSRRTKHGALLDAELLAEVYIDLIGARQSQLILAEAA
PSRSNRPGDAPRRQRETPLAARVTDADRIAHREFVATLGDKPIWNEYFGEA
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagatcgtcctcgacaccgaaaccaccggactcgatccgttgcgcggcgatcgg
ctggtcgaaatcggctgcgtcgaaatcttcaaccggatgccgaccggccagacttttcac
cgctacatcaatcccgagcgcgatatgccgcaggaagcgttcgcggtgcatgggctgtcc
gccgagtttctgtcgaccaagccgttgttcgccgaggtggtcgacgagtttttggaattc
atcgccgaggcacctttggtgattcacaacgcctcgttcgacatcggcttcatcaatgcc
gaattgggcaagatcgcgcgaccgccgattccgcgcgaccggctggtcgatacgctgctg
ttggcgcggcgcaaacatcccggcgtttccaatcggctcgacgatctgtgctcgcgctat
gcgatcgacaattcgcggcgcaccaagcacggcgcgctgctcgacgccgaattgttggcc
gaagtctatatcgacctgatcggcgcccggcagtcgcagctgattctggcggaagccgcg
ccgtcgcgctccaaccgaccgggtgacgcgccgcggcggcaacgcgaaacgccgctcgca
gcaagggtcaccgacgccgaccgcatcgcgcaccgcgaattcgtcgccacgctcggcgac
aagccgatctggaacgagtatttcggcgaggcgtga
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