Rhodopseudomonas palustris BisB18: RPC_0386
Help
Entry
RPC_0386 CDS
T00336
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_0386
Enzymes [BR:
rpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RPC_0386
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
RPC_0386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ABD85961
UniProt:
Q21CC5
LinkDB
All DBs
Position
415074..418202
Genome browser
AA seq
1042 aa
AA seq
DB search
MRVFNTPASAPFLRTLIAALVEGRLVPGFEARANPERLAEATLYLPTRRAGRMAREIFLD
VLQSDAVLLPRIVALGGIDEDELAFADDAEPFDGVASLEIPPNLAELDRRLILARLVAAW
GKELAPLVVGGPASALALAGDLARLMDDMVTRKVEWAALDGLVPDELDNYWQLTLGFLKI
AREHWPAYLAANALIEPAARRDLLIEAEAKRLAAHHTGPVIAAGSTGSMPATARFLRAIA
ALPQGAVVLPGLDTHLDDDAWRKIGGIRDANGKAVTPPSSNHPQYALHALLETFGIERRD
VAPLGAPAPRGRELLASEAMRPSNATAQWHQRLAEPAVEQNIAAGMTELAVISADNPELE
ALAIAVAMRQARELNKSAALVTPDRALARRVMAALGRWKLPFDDSGGDALIDTPPGVFAR
LSAQAATAQLEPATLLALLKHPLLRLGQAPGFWRGAIETLEQAVLRGTRPAAGSAGLSRD
FARFRDELGKLRRRETSMLHGSEPRARLNDDALDRAQALIAQLQTALAPLETLDPNRPLD
FSDLATKHRAVVAALSRDDDGFVAAFDGPQGNALNTAFDDLPAPSGLAAQPGDYTELFQT
AFADRVVRRPEAESASLRIFGPLEARLTQCDRVILGGLVEGIWPPAPRSDPWLSRPMRHQ
LGLDLPERRIGLSAHDFAQMLGADEVILSHAAKVAGAPAVASRFLHRLEAVAGAERWKAA
EARGQIYLDYAHALDRPDKVVPITQPMPRPPRDARPLQLSVTAIEDWLRDPYTIYAKFIL
KLAPLDPVDMPLSAADRGSAIHEALGEFTQVFAQALPDDPAAALRAIGQKHFAPLMERPE
ARALWWPRFLRIAHWFATWETERRLNVAGVDAETRGTLSIPLDATRRFVLSARADRIERR
ADRTFAILDYKTGRPPTGKQVRMGLSPQLTLEAAILREGGFEGIAAGSSVSELVYVKLSG
NNPPGEEKILELKRDRAEEALFPDDAAIEARAKLEALIRKFDDATTPYSSLNLPMWANRY
GDYDDLARIKEWSAAGGLGDDQ
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcaatactccggcctcggcgccgttcctgcgtacgctgattgccgcgctg
gtcgagggcaggctggtgccgggcttcgaggcccgcgccaatcctgagcggctcgccgaa
gccacgctatatctgccgacgcggcgcgccgggcggatggcgcgcgagatctttctcgac
gtgctgcagagcgacgcggtgctgctgccgcggatcgtggcgctcggcggcatcgacgag
gacgaactggcgtttgccgacgacgccgagccgttcgacggagtggcgtcgctggagatt
ccgccgaacctcgccgaactcgaccgccggctgatcctggcgcgactggtcgccgcctgg
ggcaaggagctggcgccgctggtggtcggcggcccggcctcggcgctggcgttggccggc
gatctggcgcggctgatggacgacatggtgacccgcaaggtcgagtgggccgcactcgac
gggctggtgcccgatgaactcgacaattattggcagctgacgctgggctttcttaagatc
gcgcgagaacattggccggcctatctcgccgccaacgcgctgatcgaacccgcggcgcgg
cgcgacctgctgatcgaagccgaggccaagcggctcgccgcgcatcacaccggtccggtg
atcgccgcaggctccaccggctcgatgccggcgaccgcaagatttctccgcgccatcgcc
gccttgccgcagggcgcggtggtgctgcccgggctcgacacccatctcgacgacgacgct
tggcgaaagatcggcggcatccgcgacgccaacggcaaggctgttacgccgccgtcgtcg
aatcatccgcaatacgcgctgcacgcgctgctcgagaccttcggcatcgaacgccgcgac
gtcgctccgctcggcgcgccggcgccgcgcggccgcgaattgttggcctccgaggcgatg
cggccgtccaacgccaccgcgcaatggcaccagcggctcgccgagcccgcggtcgagcag
aacatcgccgccggcatgaccgagcttgcggtgatctccgccgacaatccggagctggaa
gcgctggcgatcgcggtggcgatgcggcaggctcgcgaactcaacaagtcggccgcgctg
gtgacgcccgaccgtgcgctggcgcggcgggtgatggcggcgctgggccgctggaagctg
ccgttcgacgattccggcggcgacgctttgatcgacaccccgccgggggttttcgcacgg
ctttcggcgcaggctgcgaccgcgcagctcgagccggcgaccttgctggcgctgttgaaa
catccgctgctgcggctcggccaagcgcccggtttctggcgcggcgccatcgagacgctg
gagcaggcggtgctgcgcggcacccgtcccgccgccggcagcgcgggcctgtcccgcgac
ttcgcccggttccgcgacgaactcggcaagctgcgtaggcgcgagacctcgatgctgcac
ggctccgagccgcgcgcgcggctcaacgacgacgcgctcgatcgcgcgcaggcgctgatc
gcgcaactgcaaaccgcgctggcgccgctggaaacgcttgatccgaataggccgctggat
ttttccgacctcgccaccaagcatcgcgcggtggtcgcggcgctgtcgcgcgacgacgat
gggttcgtagcggcgttcgatggtccgcagggcaacgccctgaacaccgcgttcgacgat
ctgccggcgccgagcggactcgcggcgcaacccggcgactacaccgaactgttccagacc
gcgtttgccgaccgcgtcgtgcgccgcccggaagccgagagcgcttcgctgcggatcttc
ggtccgctggaagcgcggctgacgcaatgcgatcgggtgattctcggcgggctggtcgaa
ggcatctggccgccggcgccgcgcagcgatccctggctgagccggccgatgcggcatcaa
ttgggtctcgacctgccggagcgccgcatcgggctgtcggcgcacgacttcgcccagatg
ctcggcgccgatgaagtgatcctcagccacgccgccaaggtggccggcgcaccggcggtg
gcgtcgcgcttcctgcatcggctggaggcggtggccggcgcggaacgctggaaagccgcc
gaggcgcgcggacaaatctatctcgattatgcccacgcgctcgaccgccccgacaaggtc
gtgccgatcacgcagccgatgccgcggccgccgcgcgacgcccggccgctgcaattgtcg
gtcaccgcgatcgaggactggctgcgcgatccctacaccatctacgccaagttcattctc
aagctggcgccgctcgacccggtcgacatgccgctgtcggcggcggatcgcggctcggcg
atccatgaggcgctcggcgaattcacgcaagtttttgcgcaggcgctgccggacgatccg
gccgccgcgttgcgcgccatcgggcaaaaacatttcgcgccgctgatggaacggccggag
gcgcgcgcgctgtggtggccgcgctttctgcggatcgcccattggttcgccacctgggag
accgagcgccggctcaacgtcgccggcgtcgacgccgagacccgcggcacgctcagcatt
ccgctcgacgccacgcgtcgtttcgttctctccgcccgcgccgaccgcatcgaacgccgc
gccgaccgcaccttcgcgatcctcgactacaagaccggccgcccaccgaccggcaagcag
gtgcggatggggctgtcgccgcaactgacgctcgaagccgcgatcttgcgcgaaggcggc
ttcgaaggcatcgccgcgggctcttcggtgagtgaactggtctacgtcaaactcagcggc
aacaacccgccgggcgaagaaaaaatcctcgaactgaaacgcgaccgcgccgaagaagcg
ctgttccccgacgacgccgcgatcgaggcccgcgccaagctcgaagccttgatccgcaaa
ttcgacgatgccacgacaccctactcctcgctgaatctgccgatgtgggcgaaccgctac
ggcgactacgacgatctggcgcggatcaaggaatggtcggcggccggcgggctcggagac
gaccaatga
DBGET
integrated database retrieval system
