Rhodopseudomonas palustris BisB18: RPC_0419
Help
Entry
RPC_0419 CDS
T00336
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpc03016
]
RPC_0419
Enzymes [BR:
rpc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
RPC_0419
Transfer RNA biogenesis [BR:
rpc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RPC_0419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABD85994
UniProt:
Q21C92
LinkDB
All DBs
Position
complement(450451..451065)
Genome browser
AA seq
204 aa
AA seq
DB search
MTIRLHRGDLPDLSRYTDSVAIDTETMGLNPHRDRLCVVQLSNGDGSADVVQIPVGHSDA
PNLKKLLGDPAITKIFHFARFDLAALYNALGVMPQPVYCTKIASRLTRTYTDRHGLKDLV
REVLGVDLSKQQQSSDWGAQSLSDAQLAYAASDVLHLHGLRTRLDAMLAREGRTELAQAC
FDFLPTRAKLDLSGWAEQDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgcctgcatcgcggcgatctgccagacttgtcgcgctacaccgattcggtg
gcgatcgacaccgaaaccatggggctgaacccgcatcgcgaccggctctgcgtggtgcag
ctctccaacggcgacggcagcgccgacgtggtgcagatcccggtcggccacagcgacgcg
cctaacctgaagaaactgctgggcgacccggcgatcaccaagatcttccatttcgcgcgg
ttcgatctcgcggcgctgtacaacgcgctcggggtgatgccgcagccggtgtattgcacc
aagatcgcctcgcggctgacccgcacctatacggatcggcacggcctgaaagatctggtg
cgcgaagtgctcggcgtcgatttgtcgaagcagcagcaatccagcgactggggcgcgcaa
agtctcagcgacgcgcaattggcctacgccgcctccgacgtgctgcatttgcacggcctg
cgcacaaggctcgacgccatgctggcgcgtgaaggccgcaccgaattggctcaggcgtgt
ttcgatttcctgccgacccgcgccaaactcgacctctcaggctgggcggaacaggatatt
ttcgcgcattcctga
DBGET
integrated database retrieval system
