Rhodopseudomonas palustris BisB18: RPC_0482
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Entry
RPC_0482 CDS
T00336
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpc03016
]
RPC_0482
Enzymes [BR:
rpc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RPC_0482
Transfer RNA biogenesis [BR:
rpc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RPC_0482
Prokaryotic type
RPC_0482
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DnaB_bind
Motif
Other DBs
NCBI-ProteinID:
ABD86057
UniProt:
Q21C29
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All DBs
Position
520535..521698
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AA seq
387 aa
AA seq
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MNETTATAAIEPPSDEPIDVTTPNSAAMVSDQLTLQPDQDGGELGDRAPRANNDPRQNGR
GGKPKQNGQPRRDKRDVHGWVVLDKPIGMTSTHAVAVVKRLFSAKRAGHAGTLDPLASGG
LPIAMGEATKTVPFVMDGRKRYRFTVAWGEERDTDDTEGRATATSELRPSVEAIRALLPQ
FTGEIEQTPPQYSAIKIAGERAYDMARDGEIVPLVPRPVVIHELTLVDQPDEGHSTFEAE
CGKGTYVRALARDMGRILGCYGHICALRRTLVGPFGEQDMIPLEQLEALCDRAASGEGSL
ADALLPVETALDDIPALAVTRADAARLHRGQAVLLRGRDAPNCSGTVYVTVAGRLLALAE
LGNGELIPKRVFNLNGLTASSQPKESN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagaccaccgccaccgccgcgatcgagccgccgagcgatgagccgatcgacgtg
accactccgaattcggccgcgatggtgtccgatcagttaacgctgcagcccgaccaggac
ggcggtgagctcggcgaccgcgcgccgcgcgctaacaacgatccgcggcagaacggccgc
ggcggcaagccaaagcagaacggccaaccgcgccgcgacaagcgcgacgtccacggctgg
gtggtgctggacaagccgatcggcatgacctcgacccacgcggtcgcggtggtgaagcgg
ctgttttccgccaagcgcgccggccacgccggcacgctggatccgttggcctccggcggc
ctgccgatcgcgatgggcgaagccaccaagaccgtccccttcgtgatggacggccgcaag
cgctatcgcttcaccgtggcctggggcgaggagcgcgacaccgacgacaccgagggccgc
gccaccgcgaccagcgagctgcggccgagcgtcgaggcgattcgcgcgctgctgccgcaa
ttcaccggcgagatcgaacagaccccgccgcaatattccgcgatcaagatcgcgggcgag
cgggcctacgacatggcgcgcgacggcgaaatcgtgccgctggttccccgcccggtggtg
atccacgaattaaccctggtggatcagccggatgagggccattcgacgttcgaggcggaa
tgcggcaagggcacctatgtgcgggctttggcgcgcgatatggggagaattctgggctgt
tacggccatatctgcgcgctgcgccgcaccctggtcgggccgttcggcgagcaagatatg
attccgctggaacagttggaggctttatgcgatagagccgcgtccggcgagggtagcctc
gccgacgcgcttttgcccgttgagaccgcgctggacgacatcccggcgctggccgtcaca
cgggctgatgcggcaaggctccatcggggccaggccgttttgttgcgcggacgggatgcg
cccaactgtagcggcacagtttatgtcacggtggcaggccggcttctggccctcgccgaa
cttggcaatggcgaactcatccccaagcgcgtgttcaacctgaacggactgaccgccagt
tcgcagcctaaggaaagtaactga
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