KEGG   Rhodopseudomonas palustris BisB18: RPC_0747
Entry
RPC_0747          CDS       T00336                                 
Name
(GenBank) DEAD/DEAH box helicase-like
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rpc  Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpc03400]
    RPC_0747
Enzymes [BR:rpc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RPC_0747
    5.6.2.6  RNA 3'-5' helicase
     RPC_0747
DNA repair and recombination proteins [BR:rpc03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    RPC_0747
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C Cas3-like_C_2
Other DBs
NCBI-ProteinID: ABD86318
UniProt: Q21BB8
LinkDB
Position
complement(821360..824077)
AA seq 905 aa
MPPDDPVVPLDALPERFQQWFAARGWSPRQHQLALLAKARAQRSALLIAPTGAGKTLAGF
LPTLVELSPGLLRDMRAPLPPRSGGEGSGVGGIAADAARAVRPMPPTPDPSPPRAARAGG
GETAASELTASISLGRGVTRSRGLHTLYISPLKALAVDIARNLEAPIAQMNLPIKVETRT
GDTPVSRRGRQRKYPPDILLTTPEQLALLLASDDAPFLFGSLRRIVLDELHALVTSKRGD
LLSLGLARLWRIAPQLRAIGLSATVAEPEQLARFLVPQPPGETSAADIVVAGGAAQPIVE
MLDSKERLPWAGHSARHALPEIYDLIRRNTTTLVFVNTRSQAEMLFQELWRMNDDNLAIA
LHHGSLDVAQRRKVEDAMSAGKLRGVVCTSSLDLGVDWGDVDLVINVGAPKGSSRLMQRI
GRANHRLNEASRAVLVPANRFEVLECRVAIDAVAENAQDTPPLRLGALDVLAQHVLGCAC
GAPFAADELYEEVRTAAPYADLTRADFDDTIDFVACGGYALKVYERFARIKQDKAGQWRV
TNPRVRQMYRLNVGTIVEDTMLKVKLVRSSRDGGGHTGALGRGGRMLGQIEEYFIEQLLI
GDTFVFGGEVVRYESLVEDVAYVSRAHDKDARVPSYMGGKFPLSTYLAERVRKLLADQRA
WSTLPDQVRDWLSLQASLSLVPGTRELVVETFPRANKLYLVCYPFEGRLAHQTLGMLLTR
RLERSRAKPLGFVANEYALAVWCLGDLSQMVRRGELDLDALFDPDMLGDDLEAWLAESAL
MKRTFRSCAVISGLIPRRFTGEEKSKRQVLFSTDLVYDVLRKHQPDHLLLRAARADAATG
LLDIRRLGDMLQRIKGRIVHKELDRVSPLAVPVMLEIGREAVYGEASDELLAEAAEDLVR
EAMGD
NT seq 2718 nt   +upstreamnt  +downstreamnt
gtgccgcccgatgaccccgttgtccctctcgatgcgctgcccgagcggttccagcaatgg
ttcgcggcgcgtggctggtcgccgcgccagcaccagctggcactgctggcgaaggcccgc
gcgcagcggtccgccctgttgatcgctccgaccggcgccggcaaaaccctggcggggttt
ctgccgacgctggtggagttgagcccgggcttgctccgcgacatgcgcgctccgctcccc
ccgcgaagcgggggggaggggtcgggggtggggggtatcgccgcggatgccgcgcgcgcg
gtgaggccgatgccccccacccccgacccctccccaccacgcgctgcgcgcgcgggggga
ggggagacggctgcttctgaactgaccgcatcgatctccctcggccgcggcgtcacccgt
agcagaggcctccacaccctctacatctcgccgttgaaggcgctggcagtcgatatcgcg
cgcaatctcgaggcgccgatcgcgcagatgaatctaccgatcaaggtcgagacccgcacc
ggcgacaccccggtgtcgcgccgcggccggcagcgcaaatatccgccggacatcttgttg
accacgccggagcagttggcgttgctgctcgcctccgacgacgcgccgtttctgttcggc
tcgctcaggcgcatcgtgctcgacgaattgcacgcgctggtgacctcgaagcgcggcgat
ctgttgtcgctcggactcgcccggctgtggcggatcgcgccgcagctgcgcgccatcggg
ctgtcggcgacggtggccgagccggagcagctggcccgctttctggtgccgcagccgcct
ggcgaaacctccgccgccgacatcgtggtcgccggcggcgcggcgcagccgatcgtcgag
atgctcgacagcaaggagcggctgccctgggccgggcattcggcgcgccacgcgctgccg
gagatctacgatctgatcaggcgcaacaccaccacgctggtgttcgtcaacacccgcagc
caggccgagatgctgttccaggaactctggcgcatgaacgacgacaatctggcgatcgcg
ctgcatcacggctcgctcgacgtcgcgcagcgccgcaaggtcgaggacgcgatgtcggcc
ggcaaattgcgcggcgtggtctgcacctcgtcgctcgatctcggcgtcgactggggcgac
gtcgatctggtgatcaatgtcggcgcgccgaaaggatcctcgcggctgatgcagcggatc
ggccgcgccaatcaccgcctgaacgaagcctcgcgcgcggtgctggtgccggccaatcgc
ttcgaagtgctggaatgccgggtggcgatcgacgccgtcgcggagaacgcgcaggacacc
ccgccgctgcgcctgggcgcgctcgacgtgctggcgcagcacgtgctcggctgcgcctgc
ggcgcgccgtttgccgccgacgaactgtatgaagaagtgcggaccgccgcgccctatgcc
gacctcacgcgagcggatttcgacgacaccatcgattttgtagcctgcggcggctacgcg
ctgaaggtctacgagcgcttcgcccgcatcaagcaggacaaggccgggcaatggcgcgtc
accaacccgcgggtgcggcagatgtatcgcctcaacgtcggcaccatcgtcgaggacacc
atgctgaaggtgaagctggtgcgctcgtcgcgcgacggcggcggccacaccggcgcgctc
ggccgcggcggccggatgctcggccagattgaggagtatttcatcgagcaattgctgatc
ggcgacaccttcgtgttcggcggcgaggtggtgcgctacgagtcgctggtcgaggacgtg
gcctatgtgtcccgcgcccacgacaaggacgcccgcgtgccgtcctacatgggcggcaag
tttccgctctcgacttatctggccgaacgggtccgcaagctgctcgccgaccagcgcgcc
tggagcaccctgcccgatcaggtgcgcgactggctgtcgctgcaggcctcgctgtcgctg
gtgccgggcacgcgtgaactggtggtggaaaccttcccgcgcgccaacaagctctatctg
gtgtgctacccgttcgagggccggctcgcgcatcagacgctaggcatgctgctgacccgc
cgcttggaacgcagtcgcgcgaaaccactcggcttcgtcgccaatgaatatgcgctggcg
gtgtggtgcctcggcgacctatcgcagatggtgcgccgtggcgaactcgatctcgacgcg
ctgttcgatcccgacatgctcggcgacgatctcgaagcctggcttgcggaatccgcgttg
atgaagcgcaccttccgcagttgcgcggtgatctccgggctgatcccgcggcgcttcacc
ggcgaggaaaagagcaagcggcaggtgctgttctccaccgatctggtctacgacgtgctg
cgcaagcatcagccggatcatctgctcttacgggcggcgcgcgccgatgcggccaccggc
ctgctcgatatccgccggctcggtgatatgctccagcgcatcaagggccgcatcgtccac
aaggaactcgaccgggtgtcgccgctggcggtgccggtgatgctggaaatcggccgcgaa
gcggtgtacggcgaagcttccgacgaactgctggccgaagccgccgaggatctggtgcgc
gaggcgatgggtgattga

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