Rhodopseudomonas palustris BisB18: RPC_0861
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Entry
RPC_0861 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00061
Fatty acid biosynthesis
rpc00071
Fatty acid degradation
rpc01100
Metabolic pathways
rpc01212
Fatty acid metabolism
rpc02024
Quorum sensing
rpc04146
Peroxisome
Module
rpc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPC_0861
00071 Fatty acid degradation
RPC_0861
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPC_0861
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_0861
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_0861
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_0861
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPC_0861
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPC_0861
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPC_0861
Exosomal proteins of breast cancer cells
RPC_0861
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD86431
UniProt:
Q21B05
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All DBs
Position
948880..950424
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AA seq
514 aa
AA seq
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MRLETILRAQAVRFPDKTALVCGNERIAYRDLERRIGHVASGLRQHGLGAGDRIVVFLNN
GVEIVELFYAAFSLGAIVVPVTTRLTSHEVQHICADSQPSAIAFEGPGDAIQGVLAVHPD
ALRIAVGQSAEGAIDYASLREAEIAPLPLLSVQSDDAVIMYTSGTTGSPKGAIITHANIV
TQHCFINAVEWGISRDDRYLVTTPLAHRTGFARLSNALTLGGTLVVMKKFDPKQTIDTID
REQISVIGMVPTVCRMMLPQIEADPDKCASLRRIVVTGEAFPVELKRRFIALLPQVRLVS
FFAMTEVGGVTSLSHEEQFDHAASIGRPTPGVEVRIVDDAGNAVATGEAGELLVRVGEPG
RYSVMRGYYNRPEETAKAIEDGWIRTGDVARADDEGYLYIVDRKKDMVLSGGFNIYTKEV
ELALLANPVVAEAAVIGIPDAIYGEAVVAFVEPLPGMTPTPQSIVDGVRGLVAGYKKPKY
VFIVDELPRNSLGKVLKRELRDKVGELLKTPEAT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcgactggaaaccatcctgcgcgcgcaggcggtgcgcttccccgacaagaccgcgttg
gtctgcggcaatgagcgcatcgcctatcgcgatctcgagcgccgcatcggccacgtcgcc
agcgggctgcggcaacacgggctcggtgcgggcgaccgcatcgtggtgtttctcaacaac
ggcgtcgagatcgtcgaattgttctacgcggcgttctcgcttggcgccatcgtggtgccg
gtcacgacaaggctgacatcgcacgaggtgcagcacatctgcgccgacagccagccgtct
gccatcgcgtttgaaggcccgggcgacgcgatccaaggcgtgctcgcggtccatcccgac
gcgctgcggatcgcggtgggtcaaagtgcggagggcgcgatcgactatgccagcctgcgc
gaggccgagatcgcgccgttgccgctgttgtcggtgcaatccgacgacgcggtgatcatg
tacacctcgggcaccaccggcagcccgaagggcgcgatcatcacccacgccaatatcgtt
acccagcattgcttcatcaatgcggtggagtgggggatttcgcgcgacgatcgttatctg
gtcaccacgccgctggcgcatcgcaccggcttcgcgcggctgtccaacgcgttgacgctc
ggcggcacgctggtggtgatgaagaaattcgatcccaagcagaccatcgacaccatcgac
cgcgaacagatcagcgtgatcggcatggtaccgacggtgtgccggatgatgctgccacag
atcgaagccgatccggacaaatgcgcgtcgctgcgccgcatcgtggtcaccggcgaagcc
ttcccggtcgagctgaagcgccgcttcatcgcgctgttgccgcaggtgcggctggtgtcg
ttcttcgcgatgaccgaagtcggcggggtgacgtcgctgtcgcacgaggagcagttcgat
cacgccgcttcgattggccggccgacgccgggcgtcgaagtgcggatcgtcgacgacgcc
ggcaacgccgtcgccaccggcgaggccggcgagctcttggtgcgggtcggcgaacccggc
cgctattcggtgatgcgcggctactacaaccgcccggaagagactgcgaaagcgatcgag
gacggctggatccgcaccggcgacgtcgcccgcgccgatgacgagggctatctctatatc
gtcgaccgcaagaaagacatggtgctcagcggcggcttcaacatctacaccaaggaggtc
gagctcgccttgctggccaatccggtagtcgccgaggcggcggtgatcggcattccggac
gcgatctatggcgaggcggtggtggcctttgtcgagccgttgccgggcatgacgccgacg
ccgcaatcgatcgtcgacggcgtgcgcggcctggtggccggctacaagaagccgaaatac
gtcttcatcgtcgacgaactgccgcgcaattcgctgggcaaagtcttgaagcgcgagttg
cgcgacaaggtcggcgagctgctgaaaacgcctgaggcgacctga
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