Rhodopseudomonas palustris BisB18: RPC_0884
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Entry
RPC_0884 CDS
T00336
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPC_0884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpc03000
]
RPC_0884
Transcription factors [BR:
rpc03000
]
Prokaryotic type
Helix-turn-helix
Other families
RPC_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
GAF_3
AAA
AAA_2
AAA_16
RsgA_GTPase
HTH_50
AAA_3
bpMoxR
nSTAND3
HTH_28
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
ABD86454
UniProt:
Q21AY2
LinkDB
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Position
974219..975838
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AA seq
539 aa
AA seq
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MAMTASNAVAVETEQPVEEFTHCFTGECRVNVLPLLFQIAQIISDSEDLAKTLTIILSVM
QKQLRIHRGMVTLYDRGSETIFIHESFGLSEEEKARGIYASGEGITGKVVETGRAIVVPH
LRDDPHFLDRTQSHGHGNTNASFFCVPIIHAQKVIGTISAERTYRNSRLLRQDVQVLSTV
ALMVAPAAELYLIENIEKVRLENENRRLQSVLKERFKPSNIIGNSKPMQQVYELIHKVAG
TKATVLVLGESGVGKELVANAIHYNSATADGPFVKFNCAALPESIVESELFGHEKGAFTG
AVGLRKGRFELADGGTIFLDEVGELSLLMQAKLLRVLQEKTFERVGGSKPVKVDLRIIAA
TNRDLLEMVAKGTFREDLYYRLYVFPITIPPLRERGSDVILLADHFVARNAADSGREVKR
ISTPALNMLMAYHWPGNVRELENVIERSVILSEDGVIHGYNLPPSLQTSAETGTNFGCSL
GGKVQAVEYEMIVEALKSHRGNVTDAAQELGLTRRILGLRMDKYGINYKTFRRGREARG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgactgcgagcaatgctgtggccgtcgagaccgaacagccggtcgaggagttc
acccattgcttcaccggcgaatgccgggtgaacgtgctgccgctgttgtttcagatcgcg
caaatcatttccgacagcgaggacctcgccaagacgctgaccatcatcctgtcggtgatg
cagaagcaactgcgcatccatcgcggcatggtgacgttgtacgaccgcggctcggagacc
atcttcattcacgagagcttcggcctgtccgaagaggaaaaggcgcgcggcatctacgcg
tcgggcgagggcatcaccggcaaggtggtggagaccggccgcgccatcgtggtgccgcat
ctgcgcgacgacccgcactttctcgaccgcacgcagtcgcacggccacggcaataccaac
gcctcgttcttctgcgtgccgatcattcacgcgcaaaaggtgatcggcaccatcagcgcc
gagcggacctaccgcaactcgcggctgctgcggcaggacgtccaggtgctctccacggtg
gcgctgatggtggcgccggcggccgaactctatctgatcgagaacatcgagaaggtccgg
ctggagaacgagaaccgccggctgcagagcgtgctgaaggagcgattcaagccctccaat
atcatcggcaattccaagccgatgcagcaggtttacgagctgatccacaaggtcgccggc
accaaggcgaccgtgctggtgctcggcgaaagcggcgtcggcaaggagctggtcgccaac
gcgatccactacaacagcgccaccgccgacggcccgttcgtcaagttcaactgcgcagcg
ttgccggagagcatcgtcgagagcgaattgttcggccatgagaagggcgccttcaccggc
gcggtggggttgcgcaagggccgtttcgaactcgccgacggcggcaccatctttctcgac
gaggtcggcgaactgagcctgctgatgcaggcgaaactgctgcgggtgctgcaggaaaag
accttcgagcgggtcggcgggtcgaagccggtgaaggtcgatctgcggatcatcgccgcc
accaaccgcgatctgttggagatggtggcgaagggcacgttccgggaggacctgtactac
cggctctatgtgtttccgatcaccattccgccgctacgggagcgcggcagcgacgtgatc
ctgttggcggaccacttcgtcgcccgcaacgccgcagatagcggccgcgaggtgaaacgg
atttcgaccccggcgttgaacatgctgatggcctatcactggccgggcaacgtccgcgag
ctggagaacgtcatcgagcgctcggtgattctttcagaggacggggtgatccacggctac
aacctgccgccgtcgctgcagacctcggccgagaccggcaccaatttcggctgtagcctc
ggcggcaaggtgcaggcggtggaatacgagatgatcgtcgaggcgttgaagagccaccgc
ggcaacgtcaccgacgccgcgcaagagctcggcctgacgcggcgcatcctcggcctgcgg
atggacaaatacggcatcaactacaagacctttcgccgcggccgcgaggcgagggggtag
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