Rhodopseudomonas palustris BisB18: RPC_1145
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Entry
RPC_1145 CDS
T00336
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpc03009
]
RPC_1145
Enzymes [BR:
rpc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
RPC_1145
Ribosome biogenesis [BR:
rpc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RPC_1145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRM5-TYW2_MTfase
MTS
Methyltransf_25
Methyltransf_31
Methyltransf_12
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
ABD86708
UniProt:
Q21A78
LinkDB
All DBs
Position
complement(1245048..1246286)
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AA seq
412 aa
AA seq
DB search
MTETLIIDHVGHRGDGVATQRGEALYVPYTLGGETVEVDAVAGHPDRRVLLRVDQPSAER
IAPFCKHFGVCGGCAIQHWQAEPYQAWKRQLVIAALAQAKIDCEVAPLIDAHGAGRRRIT
LHARKGTHEVLKVGFTAAGSHDIVPIDACPILDPGLDGALEAAWALAEALIETGKPLDIQ
VTAADNGLDVDIRGSGPLPSKLIAALSRLAEQHKLARLTRHGELVLMRKPPVISIGPAHL
TLPPGAFLQATAAGEATLAALAIERCGKAKLIVDLFCGVGPFALRLAAKAKVLAYDSEPA
AIAALQAAAKTPGLKPLTAEVRDLFRRPLVTQELRDVDAVVFDPPRQGAQAQAEKLAAGK
VATVVAVSCNAATFARDARILIDGGYQIGTVTPVDQFRHTPHVELVAKFSKK
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaacgctgatcatcgaccatgtcgggcaccgcggcgacggcgtggcgacgcag
cgcggcgaagcgctgtatgtgccctatacgctcggcggcgagaccgtcgaggtcgacgcc
gtcgccggccatccggatcgccgggtgctgctgcgcgtggatcagccgagcgcggagcgg
atcgcaccgttctgcaaacatttcggcgtctgcggcggctgcgccatccagcattggcag
gctgagccgtatcaggcctggaagcggcaattggtgatcgccgcgctggcgcaagccaag
atcgattgcgaggtggcgccgttgatcgacgcccacggcgccggccgccgccgcatcacg
ctgcacgcccgcaagggcacccatgaggtgctcaaggtcggcttcaccgccgcgggcagc
cacgacatcgtgccgatcgatgcctgcccgatcctcgatcccgggctcgacggcgcgctg
gaagccgcctgggcgctggccgaggcgctgatcgagaccggcaagccgctcgacatccag
gtcaccgccgccgacaacgggctcgacgtcgatatccgcggctccgggccgctgccgtcg
aagctgatcgcggcgctgtcgcggctcgccgagcagcacaaactggcgcggctgacccgg
cacggcgagttggtgctgatgcgcaagccgccggtgatcagcatcggacctgcgcatctg
acgctgccgcccggcgccttcctgcaggccaccgcggccggcgaagcaacactggcggca
ttggcgatcgagcgctgcggcaaggccaaactgatcgtcgatctgttctgcggcgtcggg
ccgttcgcgctgcggctggcggcgaaggccaaggtgttggcttacgacagcgagccggcg
gcgatcgccgcgctgcaggccgcggccaagaccccggggctgaagccgctcactgccgaa
gtgcgcgacctgttccgccggccgctggtgacgcaggaactgcgcgacgtcgacgccgtg
gtgttcgatccgccgcggcagggcgcgcaggcgcaggcggaaaaactcgccgccggcaag
gtggcgaccgtggtggcggtgtcgtgcaacgctgccacctttgcccgcgacgcgcggatc
ctgatcgacggcggatatcagatcggcacggtgaccccggtcgatcagttccgccatacg
ccgcatgtcgaactggtggcgaagttttccaagaagtaa
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