Rhodopseudomonas palustris BisB18: RPC_1749
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Entry
RPC_1749 CDS
T00336
Name
(GenBank) NapC/NirT cytochrome c-like
KO
K03532
trimethylamine-N-oxide reductase (cytochrome c), cytochrome c-type subunit TorC
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00680
Methane metabolism
rpc01100
Metabolic pathways
rpc01120
Microbial metabolism in diverse environments
rpc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
RPC_1749
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPC_1749
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpc02000
]
RPC_1749
Transporters [BR:
rpc02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
RPC_1749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cytochrom_NNT
Cytochrome_C7
Mtrc-MtrF_II-IV_dom
Cytochrom_CIII
Cytochrom_c3_2
Haem_bd
Cytochrom_c_NrfB-like
DUF2182
DUF6486
Cytochrome_CBB3
Motif
Other DBs
NCBI-ProteinID:
ABD87308
UniProt:
Q217X8
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Position
1902345..1903502
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AA seq
385 aa
AA seq
DB search
MIQFLRSRGSKWTLALVAVAGAVAGVIGWGGFNTAMEATNSLEFCISCHEMRDTVFKEYQ
KSIHYTNASGVRAACPDCHVPKQWLPKFIRKVEASSEIYHKLVGTIDTPEKFEAARLGLA
KRVWATMKNTDSRECRNCHSFQTMDFHKQRPAASEAMQKGMADGKTCIDCHKGIAHKMPD
MSVGYRSIFNELAASAKTLQPKVGDTLATLITTSFYLDKPGKDDPADGRLLAATPMKVTA
VDGPLLQVQLTGWQQEGSEQMLYARQGKRIPSAALGPEAVEKVTSVSTMTDPDTDQVWSE
GKLAVWVKNENLVADAAKLNAYGAEMYSSSCGLCHALPATGHFLANQWIGNLNAMKRFVT
LDDEQFRMVQKYVQMNAQDTGGKHE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgattcaatttctgcgcagccgcggttcgaaatggaccctggccctcgttgccgtggca
ggtgctgtcgcgggagtgatcggttggggcggcttcaacaccgcgatggaagccaccaac
agcctcgagttctgcatctcgtgccacgagatgcgcgacaccgtcttcaaggaatatcaa
aaatcgattcactacaccaacgcctcaggcgttcgtgcggcctgcccggactgccatgtg
ccgaagcaatggctgccgaagttcatccgcaaggtcgaggccagcagcgaaatctaccat
aagttggtcggcaccatcgacaccccggagaagttcgaggccgcgcgtcttggactggcc
aagcgggtgtgggcgacgatgaagaacaccgacagccgcgagtgccgcaattgtcactcg
ttccagacgatggatttccacaagcagcgcccggccgcctcggaggccatgcagaagggc
atggccgacggcaagacctgcatcgattgtcacaagggcatcgcccacaagatgcccgac
atgagcgtcggctatcgttcgatcttcaacgagctggcggcatcggccaagacgttgcag
cccaaggtcggcgacaccctcgccaccttgatcacgacgtcgttctatctggacaagccc
ggcaaggatgatccagccgacggccggctgctggcggcgaccccgatgaaggtcacggca
gtggacggccccttgctgcaggtgcaactgaccggctggcagcaggaaggctccgagcag
atgctctatgcccgacagggcaagcggattccctcggccgcgctcggtcccgaagcggtg
gagaaggtcaccagcgtcagcaccatgaccgatcccgacaccgatcaggtctggagtgaa
ggcaagctcgcggtctgggtgaagaacgaaaacctggtcgccgatgcggccaagctcaac
gcctacggcgccgagatgtactcatcaagctgcgggctctgccacgccttgccggcgacc
gggcacttcctcgccaatcagtggatcggcaatttgaacgcgatgaaacgcttcgtcacc
ctcgacgacgagcagttccggatggttcagaagtacgtccagatgaacgcgcaggacacc
ggaggcaagcatgagtga
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