Rhodopseudomonas palustris BisB18: RPC_2162
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Entry
RPC_2162 CDS
T00336
Name
(GenBank) thiamine biosynthesis protein ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00730
Thiamine metabolism
rpc01100
Metabolic pathways
rpc01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RPC_2162
Enzymes [BR:
rpc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
RPC_2162
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ABD87716
UniProt:
Q216H0
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Position
complement(2354093..2356222)
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AA seq
709 aa
AA seq
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MNIRSNPDTTLPAVTTGPLPSSRKIFATPDEAPELRVPLREIILSDGAGEPNLPVYDTTG
PYTDPSVTIDVNAGLSRIRTAWVKERGGVEEYQGRDVKPEDNGNVGAAHAAKSFTAYHKP
LRGLDAPAAGTANSPPPRGEGSGVGGATNTVPSSTPLPTPPPQGGREQGIAYACGPHLPP
MVTQLEFARAGIITKEMIYVATRENLGRKQQLARAEAALADGESFGASVPAFVTPEFVRS
EIARGRAIIPANINHGELEPMIIGRNFLTKINANIGNSAVTSSVEEEVDKMVWAIRWGAD
TVMDLSTGRNIHTTREWILRNAPIPIGTVPIYQALEKCEGDPVKLTWELYRDTLVEQCEQ
GVDYFTIHAGVRLAYIHLTANRTTGIVSRGGSIMAKWCLAHHQESFLYTHFDEICDLMRK
YDVSFSLGDGLRPGSIADANDRAQFAELETLGELTKIAWDKGCQVMIEGPGHVPLHKIKI
NMDKQLKECGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAMLCYVTPKEHLGLP
DRNDVKVGVITYKIAAHASDLAKGHPAAQLRDDALSRARFDFRWQDQFNLGLDPDTAQAF
HDETLPKDAHKVAHFCSMCGPKFCSMKITQDVRDYAAGLGDNEKAALNLAGGSSLGSVGM
SISGKLEDGLPADAFAKAGMAEMSEKFRTMGEQLYLDAEKVKESNKALS
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccggtccaatcccgacaccacgctgcccgctgtgaccaccggcccgctgccc
tcctcgcgcaagatcttcgcgacgcccgacgaagcgccggagctgcgcgtgccgttgcgc
gagatcatcctcagcgacggcgccggcgaaccgaacctgccggtgtacgacaccaccggc
ccctacaccgatcccagcgtcaccatcgacgtcaatgccgggctgtcgcggatccgcacc
gcctgggtgaaagagcgcggcggcgtcgaggaatatcaaggccgcgacgtcaagccggag
gacaacggcaatgtcggcgccgcccacgccgcaaaatccttcaccgcctatcacaagccg
ctgcgcggactggatgcgcccgccgcaggcacggcgaactcccctccccctcgcggggag
gggtcgggggtggggggagcaacaaacactgtgccctcctctacccccctccccacccct
cccccgcaaggggggagggagcaaggcatcgcctatgcgtgcggcccacacctgccgccg
atggtgacgcagctggaatttgcccgcgcaggcatcatcaccaaggagatgatctacgtc
gccacccgggaaaacctcggccgcaaacagcagctcgcgcgcgccgaggcagcgctggcc
gacggcgaatcgttcggcgcgtcggtgccggccttcgtcaccccggaattcgtccgcagc
gagatcgcgcgcggccgcgcgatcatccccgccaacatcaaccacggcgagttggagccg
atgatcatcggccgcaattttctcaccaagatcaacgccaatatcggcaacagcgctgtc
acctcctcggtcgaggaagaagtcgacaagatggtgtgggcgatccgctggggcgccgac
accgtgatggacctctccaccggccgcaacatccacaccacgcgggaatggattctgcgc
aacgcgccgatcccgatcggcaccgtgccgatctatcaggcgctggagaagtgcgaaggc
gatccggtcaagctcacttgggagctatatcgcgacacgctggtcgagcaatgcgaacag
ggcgtcgattacttcacgatccacgccggcgtgcggctggcttacatccacctcaccgcc
aaccgcaccaccggcatcgtgtcgcgcggcggctcgatcatggcgaagtggtgcctggcg
catcaccaggagagcttcctctacacgcatttcgacgagatctgcgacctgatgcgcaaa
tacgacgtgtcgttctcgctcggcgacggcctgcggccgggctcgatcgcggatgccaac
gaccgcgcgcaattcgccgaattggagacgctcggcgagctcaccaagatcgcctgggat
aagggctgccaggtgatgatcgaaggccccggccatgtgccgctgcacaagatcaagatc
aacatggacaagcagctgaaagaatgcggcgaggcgccgttctatacgctcgggcctttg
acaacagacattgcgcctggctacgaccacatcacctcgggcattggggcggcgatgatc
ggctggttcggctgcgcgatgctgtgctacgtcacgccgaaggaacaccttggcctgccc
gatcgcaacgacgtcaaggtcggggtgattacttacaagatcgccgcccatgcctccgat
ctcgccaagggccatccggcggcgcaattgcgcgacgacgcgctgtcgcgcgcccgcttc
gacttccgctggcaggatcagttcaacttaggcctcgatcccgacaccgcgcaggcgttc
cacgacgagacgctgccgaaggacgcccacaaggtggcgcatttctgctcgatgtgcgga
ccgaaattctgctcgatgaagatcacacaggacgtgcgcgactacgcggcggggcttggc
gacaacgagaaggcggcgctcaatctggccggcggcagctcattgggcagcgtcgggatg
tcgatctccggcaagctggaagacggcctgcccgccgacgcttttgccaaggcgggcatg
gcggagatgagcgagaagtttcggactatgggcgagcaactctatctcgacgccgagaag
gtgaaggaaagcaacaaggcgctgtcgtag
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