Rhodopseudomonas palustris BisB18: RPC_2173
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Entry
RPC_2173 CDS
T00336
Name
(GenBank) Outer membrane autotransporter barrel
Organism
rpc
Rhodopseudomonas palustris BisB18
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
ABD87727
UniProt:
Q216F9
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All DBs
Position
2365523..2369065
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AA seq
1180 aa
AA seq
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MTTADTIRGRSGPCGRVLRGLLTSLLSLGCVLCLFGTAARAIDVGSRGDWDNAVVAVGAA
AAGATVTINITAGFTLTSSLPQLLAVQLNVTVNVNGNGLVIDGGSTYQGIQVNGANALTV
NISNLSVINTKATGGSGLAGENGYYSGGLSYGSGGGGGGGLGGGGGLLVGSGAIVTLSAV
TFTGNIAQGGAGGVGGSAQNTVSDPVNGGNGGAGGVANNSGATGGGGAGGTGGHTGTQGT
AGSPGAAFGDGGGGGGGSGTTASINYTSNNPGGSGNANGGAGGQGGDGATNASGAGGPGP
GADGGNGGVGGGARGGAIYVATGGSLTILDTPVNGATAIGGAGGTGGTGTGPSAIPGGAG
STGSTAGAGIFLSGVMANIGVSAGNVTYANSIGGTGLTTGGVNTAITKLGAGTLALSATN
DFTGNVAIAAGTLSIAATANLGNVANDVVISDGAGLAVTATTTLAAARAFFIAGTSTIDV
ASATTTTLQGVVGNGTSAGSLVKSGDGTLLLSATNTYSGATTVSGGTLRAGASNAIPSGT
AMTVANAATFDLNGFARGLGSLAGAGTVSNGGGSAVTLTTGSNGTDTVFSGVVQNGVNAV
SLTKTGAGQLTLDGANAYSGATTVNAGTLSVNGSIASSALTSVNAGATLAGTGSVGNTTI
NGGTLAPGNSIGTLSVTGNLTLTAAASYMVEISPTASDRTNVSGTATLGGATVNASFAAG
SYANKQYTLVNATGGIIGTFGALSNSNLPSGFKSSLGYDANNAYLDLVLDLAPTPSPTGD
TPAVGLNVNQARVASALSNYFARAGSIPMVFGALTPAGLSIAAGEPATGMQQSTFTAMTL
FMGVLTDPFAAGRGVDPSSGAAAFADAAGERGAPRGAFAMVGKAVPHPLPRPIVEPRWNV
WAAGFGGSQTTDGNASQGSNRATSRLAGTAVGADYWLSPMTVAGVALAGGGSSFGVDGLG
SGRSDLFQAGAFIRHQRGAAYVTAAAAYGWQDVTTDRTVALGGLAQLHGSFNANAYSGRV
EAGNRYLLPSFGGFGSFGLTPYAAAQVTAFDLPAYAEQANAGPNTFALAYGAKTATATRS
ELGLRSDKAFALNAALLTLRGRVAWAHDFDTDRSLAATFQTLPGASFVVGGARVARDAAL
TTAQAELSFAGGISLLASFEGEFSDVSRSYAGKGVVRYAW
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgacgactgctgacaccatccgaggccggtccggcccgtgcggacgcgtcctgcgcggc
ctgctgacctcgctgttgtcactcgggtgtgtgctctgcctgttcggcaccgctgcccgc
gcgatcgatgtcggcagtcgtggcgattgggataacgccgtcgtagcggtcggcgcggcc
gccgcgggggccacggtcaccatcaacatcaccgccggcttcacgctgacgagttcgctg
ccgcagctgttggccgtccaactcaacgtcaccgtcaacgtcaacggcaacggcctggtg
atcgacggcggctcgacctatcagggcatccaggtcaacggcgccaatgccttgaccgtc
aacatttccaatctgtcggtgatcaacaccaaggcgaccggcggcagcggcttggccggg
gagaacggctattacagcggcgggctgtcctacggctcgggcggcggtggcggcggcggg
ctcggcggcggcggcggcctcttggtcggcagcggcgccatcgtgacgctgagcgcggtg
accttcaccggcaacatcgcgcaaggcggcgccggcggcgtgggcggttcggcacagaat
acggtttcggatccggtcaatggcggcaatggcggtgccggcggcgtcgccaataattcc
ggagcgaccggcggcggcggcgccggcggcaccggcggccacaccggcacccagggaacc
gccgggtcgccgggagcggcgttcggcgatggcggcggcggcggcggcggctccggcacc
accgcgagcatcaactacacctcgaataatcccggcggcagcggcaatgctaacggcggc
gccggcgggcagggcggcgacggtgccaccaacgccagcggcgccggtggaccggggccg
ggcgcggacggcggcaacggcggcgtcggcggcggtgcccgcggcggcgcgatctatgtc
gccaccggcggcagcctgaccattctcgacaccccggtcaacggcgccactgctatcggc
ggcgccggcggcaccggcggcaccggcaccggtccgagtgcgatccccggcggcgccggc
agcaccggcagcaccgccggcgccggcatctttctcagcggcgtgatggccaatatcgga
gtgtcggcgggcaacgtcacctatgccaacagcatcggcggcaccggcctgaccaccggc
ggcgtcaacaccgcgatcaccaagctcggcgccggcacgctggcgctgtcggcgaccaat
gatttcaccggcaatgtcgcgatcgccgccggcacgctgtcgatcgccgccacggccaat
ctcggcaacgtcgccaatgacgtggtgatctcggacggcgccggcctggccgtcaccgcg
acgacgacgctggccgctgcccgtgccttcttcatcgcaggcacgtccaccatcgacgtc
gccagcgccaccaccacgacgctgcagggcgtcgtcggcaacggcacctcggccggctcg
ctggtcaagagcggcgacggcacgctgttgctgtcggcgaccaacacctacagcggcgcc
accacggtttccggcggcacgctgcgcgccggggcgtcgaatgcgatcccgagcggcacc
gcgatgaccgtcgccaatgccgcgaccttcgacctcaacggctttgcgcgcgggctcggc
tcgctggccggcgccggcaccgtcagcaatggcggcggcagcgccgtcacgctgaccacc
ggcagcaacggcaccgacaccgtgttctccggcgtcgtgcagaacggcgtcaatgcggtg
tcgctgaccaagaccggcgccggccagctgacgctcgacggcgccaacgcctattcgggc
gccaccacggtcaacgccggcacgctttcggtgaacggttcgatcgcgagctcggcgctg
accagcgtcaatgccggcgccacgctcgccggcaccggcagcgtcggcaacaccacgatc
aatggcggtacactcgccccgggcaattcgatcggcacgctgagcgtgaccggcaacctc
accctcacggccgccgcgagctacatggtcgaaatctcgccgaccgcctccgaccgcacc
aacgtcagcggcacagcgacgctcggcggcgccacggtgaatgccagtttcgcggccggc
agctatgccaacaagcaatacaccctggtcaatgccaccggcggcatcatcggcaccttc
ggggcgctctcgaacagcaacctgccgtccggcttcaaatccagcctcggctacgacgcc
aataacgcctatctcgatctggtgctcgacctggcgccgacgccttccccgaccggagac
acgcctgcggtcggcctcaacgtcaaccaggcccgggtcgccagcgcgctgagcaattac
ttcgccagggccggcagcattccgatggtgttcggcgcgctgacgccggccgggctgagc
atcgcggcgggcgagccggccaccggcatgcagcagtccacattcactgcgatgacgctg
ttcatgggcgtgctgaccgatccgttcgccgccggacgcggcgtcgatccgtcgagcggc
gctgcggccttcgccgacgcggccggcgagcgcggcgcgccgcgtggcgcctttgcgatg
gtcggcaaggcggtgccgcatccgctgccgcgcccgatcgtcgagccgcgctggaacgtc
tgggccgcgggcttcggcggctcgcagaccaccgacggcaacgcgtcgcagggatccaac
cgcgccacctcgcggctggccggcaccgcggtcggcgccgactattggctgtcgccgatg
accgtcgctggcgtggcactggcgggcggcggcagcagtttcggcgtcgatggattgggc
agcggccgttccgacctgttccaggccggcgccttcatccggcatcagcgcggcgcggct
tacgtcaccgccgccgccgcttacggctggcaggacgtcaccaccgaccgcaccgtcgcg
ctcggcgggctggcgcagttgcacggcagcttcaacgccaacgcctattccggccgcgtc
gaagccggcaaccgctatctgctgccgagcttcggcggatttggcagcttcggcctgacg
ccctacgccgcggcgcaagtcaccgcgttcgatctgccggcctatgccgagcaggccaat
gccggccccaacaccttcgcgctggcctatggcgccaagaccgccaccgcgacccgcagc
gaactgggcctgcgcagcgacaaggcgttcgcgctcaacgcggcgctgttgacgctgcgc
ggccgcgtcgcctgggcgcatgatttcgataccgaccgcagcctcgccgcgaccttccag
acgctgccgggggcgtccttcgtggtcggcggcgccagggtggcgcgcgatgccgcgctg
accacggcgcaggcggaactgagcttcgccggcggcatctcgctgctggcgagcttcgag
ggcgagttctccgacgtcagccgctcctatgccggcaagggcgtggtgcgctacgcttgg
tga
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