Rhodopseudomonas palustris BisB18: RPC_2227
Help
Entry
RPC_2227 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00061
Fatty acid biosynthesis
rpc00071
Fatty acid degradation
rpc01100
Metabolic pathways
rpc01212
Fatty acid metabolism
rpc02024
Quorum sensing
rpc04146
Peroxisome
Module
rpc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPC_2227
00071 Fatty acid degradation
RPC_2227
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPC_2227
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_2227
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_2227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_2227
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPC_2227
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPC_2227
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPC_2227
Exosomal proteins of breast cancer cells
RPC_2227
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD87781
UniProt:
Q216A5
LinkDB
All DBs
Position
2427731..2429425
Genome browser
AA seq
564 aa
AA seq
DB search
MSPMTHPGEQFYPAGLTWDAPVARGTLPDLLSTSATRYGARPAIEFRDRAISFTELEALV
ETAAAALLRAGYGKDCSVGLYLGNLPDHPINFFGALKAGARVVHLSPLDGERALSHKLSD
SGARILITSDLAGLLPMALKFLEKGLLDRLIVCDDEHWGAVGNPHTPIPDDPRIVRYADF
TKDATPPAQWPALKPDDVAVLQYTGGTTGLPKGAMLSHGNLTSAVSIYDLWGARDRAERN
TVERVICVLPLFHIYALTVILLRSLNNGDLISLHQRFDVAAIFRDIEEKRATVFPGVPTM
WIALANDPSLESRDLSSLATCGSGGAPLPVEVAKVFERKTGLQLKSGWGMTETCSPGTSH
PLEGPDKPGSIGLMLPGIELDVVSLDDTSKPLPPGEVGELRIRGPNVTRGYWNRAQETAE
AFVGDRFLTGDIGTMDRDGYFFLVDRKKDMIICGGFNVYPQMIEQAIYEHPSVQEVIVIG
IPDQYRGEAAKAFVKLRSGAAPFSVDALREFLKGKLGKHELPAALELVDELPRTSVGKLS
RHELRAKQPNHQTQQQQITTGGRP
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgacccatcccggcgaacagttctatcccgcgggcctcacctgggacgcg
ccggttgcgcgcggcacgctgcccgatctgctatcaacctcggctacccgctacggcgcg
cggccggcgatcgagtttcgcgaccgcgcgatcagcttcaccgagttggaagcgctggtc
gaaaccgcggcggcggcgttgctgcgcgccggctatggcaaggactgttcggtcgggctg
tatctcggcaatctgccggatcatccgatcaatttcttcggcgcgctgaaggccggcgcc
cgcgtcgtgcatctgtcgccgctcgacggcgagcgcgcgctgtcgcacaagctcagcgat
tccggcgcgcggatcctgatcaccagcgatctcgccgggctgctgccgatggcgctgaaa
tttctggagaaggggctgctcgaccggctgatcgtctgcgacgacgagcattggggcgcg
gtcggcaatccgcacaccccgatccccgacgatccgcgcatcgtccgctacgccgatttc
accaaagatgcgacgccgccggcgcaatggccggcgcttaagcccgacgacgtcgccgtg
ctgcaatacaccggcggcaccacgggcttgccgaaaggcgcgatgctgagccacggcaat
ctgacatcggcagtgtcgatctacgatctgtggggtgccagggaccgcgccgaacgcaac
acggtggaacgggtgatctgcgtgctgccgctgttccacatctacgcgctcaccgtgatc
ctgttgcgctcgctcaataacggcgacctgatctcgctgcatcagcgcttcgacgtcgcg
gcgatcttccgcgacatcgaagagaagcgcgccacggtgtttcccggggtgccgacgatg
tggatcgcgctggccaacgatccgtcgttggagagccgcgacctgtcgtcgctggcgact
tgcggctccggcggcgcgccgctgccggtcgaggtcgccaaagtgttcgagcgcaagacc
gggctgcaattgaagagcggctggggcatgaccgaaacctgctcgcccggcacctcgcat
ccgctcgaaggcccggacaagccgggctcgatcgggctgatgctgcccggcatcgagctc
gacgtggtgtcgctcgatgatacttcgaagccgctgccgccgggcgaagtcggcgagctg
cggatccgcggccccaacgtcacgcgcggttactggaaccgggcgcaggagaccgccgaa
gccttcgtcggcgaccgctttctcaccggcgatatcggcaccatggaccgcgacggttac
ttctttctggtcgaccgcaagaaggacatgatcatctgcggcggcttcaacgtctatccg
cagatgatcgagcaggcgatctatgaacacccgagcgtgcaggaagtgatcgtgatcggc
attcccgatcaatatcgcggcgaggcggccaaggccttcgtcaagctgcgtagcggcgcc
gcgccgttcagcgtcgacgcgctgcgggaatttcttaaaggcaagctcggcaagcacgaa
ctgccggcggcgctggaattggtcgacgaattgccgcgcaccagcgtcggcaaattgtcg
cgccacgagttgcgcgccaagcaacccaaccaccaaactcaacaacaacaaatcacaaca
ggaggtcgcccatga
DBGET
integrated database retrieval system
