Rhodopseudomonas palustris BisB18: RPC_2582
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Entry
RPC_2582 CDS
T00336
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc02024
Quorum sensing
rpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPC_2582
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_2582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpc03019
]
RPC_2582
03036 Chromosome and associated proteins [BR:
rpc03036
]
RPC_2582
Messenger RNA biogenesis [BR:
rpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RPC_2582
Chromosome and associated proteins [BR:
rpc03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
RPC_2582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
ABD88132
UniProt:
Q214Q4
LinkDB
All DBs
Position
2805552..2805800
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AA seq
82 aa
AA seq
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MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDAPA
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccgcgcacagaatctacaggatacttttctcaaccacgtacgtaagacc
aaaacgccactcacgatctttctggtcaacggggtcaagctgcaaggcattgtcacctgg
ttcgacaatttctgcctgctgctgcggcgcgacggacattcgcagctggtctacaagcat
gcgatctccaccatcatgccgggtgctccgatccagctgttcgaaggtggcgaggacgcc
ccagcttga
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