KEGG   Rhodopseudomonas palustris BisB18: RPC_2582
Entry
RPC_2582          CDS       T00336                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
rpc02024  Quorum sensing
rpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RPC_2582
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    RPC_2582
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpc03019]
    RPC_2582
   03036 Chromosome and associated proteins [BR:rpc03036]
    RPC_2582
Messenger RNA biogenesis [BR:rpc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     RPC_2582
Chromosome and associated proteins [BR:rpc03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    RPC_2582
SSDB
Motif
Pfam: Hfq Hfq_1
Other DBs
NCBI-ProteinID: ABD88132
UniProt: Q214Q4
LinkDB
Position
2805552..2805800
AA seq 82 aa
MAADRAQNLQDTFLNHVRKTKTPLTIFLVNGVKLQGIVTWFDNFCLLLRRDGHSQLVYKH
AISTIMPGAPIQLFEGGEDAPA
NT seq 249 nt   +upstreamnt  +downstreamnt
atggcggccgaccgcgcacagaatctacaggatacttttctcaaccacgtacgtaagacc
aaaacgccactcacgatctttctggtcaacggggtcaagctgcaaggcattgtcacctgg
ttcgacaatttctgcctgctgctgcggcgcgacggacattcgcagctggtctacaagcat
gcgatctccaccatcatgccgggtgctccgatccagctgttcgaaggtggcgaggacgcc
ccagcttga

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