Rhodopseudomonas palustris BisB18: RPC_2584
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Entry
RPC_2584 CDS
T00336
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpc03032
]
RPC_2584
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_2584
Enzymes [BR:
rpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RPC_2584
DNA replication proteins [BR:
rpc03032
]
Prokaryotic type
DNA Topoisomerases
RPC_2584
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RPC_2584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABD88134
UniProt:
Q214Q2
LinkDB
All DBs
Position
2807631..2810414
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AA seq
927 aa
AA seq
DB search
MADTDDNKPGEPPAPSDIRPVSILDEMKRSYLDYAMSVIVARALPDARDGLKPVHRRILY
AMYENGFEWNKPYRKSARTVGDVIGKYHPHGDQSVYDAMVRMAQDFSMRVPLIDGQGNFG
SVDGDSAAAMRYTESRLTKIAQLLLDDLDKDTVDYQDNYDGSFREPRVLPAKFPNLLVNG
AGGIAVGMATNIPPHNLGEVIDACVALIDDPALSIDDLTKIVPGPDFPTGGIILGRAGIR
LAYHTGRGSIVMRGKVAIEPTRKDREAIIISEIPYQVNKATMVERIAELVREKKIEGISD
LRDESDRDGFRVVIELRRDAVPDVVLNQLYRFTPLQTNFGANMVALDAGRPQLMNLKDLL
RLFVAFREQVVTRRTKFLLNKARDRAHVLVGLAIAVANIDEIIRVIRTSPDPATARDTLM
ARDWEAKDVAAMITLIDDPRHRLNADGTARLSFEQAKAILDLRLARLTALGREEISEELD
KLAIEIADYLEILRSRARVQTIIKEELAAVKAEFATPRKTTIIEQEGEVEDEDLIQREDM
VVTVSHAGYVKRVPLSTYRAQRRGGKGRSGMQTREEDFVSRLFVASTHTPVLFFSSRGQV
YKEKVWRLPIAPPNGRGKALINILPLEQGERITTIMPLPEDESSWAELDVMFATTRGTVR
RNKLSDFVDVRRSGIIAMKLDEGEAIVDVQICTDRDDVLLTAAGGQCIRFAVTDVRVFQS
RASMGVRGMALANGDQVISLTILRHFDANPAERSTYLKQSGAIRRAATGEEAEAVEGSEL
AAEVADAEPEEVDAIASLSPDRYAEMSANEQFVLTLSENGFGKRTSSFEYRTTGRGGKGI
VAMAVNARNGKLVASFPVEEEDQIMLVTDKGQLIRCPVGGIRIVGRSTQGVTVFNTAEDE
HVVSVERIGEDTENGNGNGHDNGQDGG
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
ttggccgacaccgacgacaacaaacctggggagccgccggcgccctcggatatccgcccc
gtttcaattctcgacgagatgaaacgcagctacctcgattacgcgatgagcgtgatcgtg
gcccgcgcgttgccggacgcccgcgacggcttgaagccggtgcaccggcgcattctctac
gcgatgtacgagaacggcttcgagtggaacaagccgtatcgcaagtcggcgcgtaccgtc
ggcgacgtcatcggtaagtatcacccgcacggcgaccagtctgtctatgacgccatggtc
cggatggcgcaggacttctcgatgcgcgtgccgctgatcgacggccagggcaatttcggt
tcggtcgacggcgattccgcggccgcgatgcggtacaccgagtcccggctgaccaagatc
gcgcagctgttgctcgacgatctcgacaaggacaccgtcgactatcaggacaactatgac
ggctcgttccgcgagccccgggtgctgcctgcgaaattccccaatctgttggtcaacggc
gccggcggcatcgccgtcggcatggcgaccaacatcccgccgcacaatctcggcgaggtg
atcgacgcctgcgtagcgctgatcgacgatcctgcgctcagcatcgacgatctcaccaag
atcgtgccgggtccggatttcccgaccggcggcatcattttgggccgcgccggcatccgg
ctggcctatcacaccggccgcggctcgatcgtgatgcgcggcaaggtcgccattgaaccg
acccgcaaggatcgcgaagcgatcatcatctcggaaattccctaccaggtgaacaaggcc
accatggtggagcgcatcgccgaactggtgcgcgagaagaagatcgaaggtatctccgat
ctgcgcgacgaatccgaccgcgacggttttcgcgtggtgatcgaattgcggcgggatgcg
gtgcccgacgtggtgctgaatcagctgtatcgcttcacgccgctgcagaccaatttcggc
gccaacatggtggcgctcgatgccggccgtccgcagctgatgaacctgaaggatctattg
cggctgttcgtggcgttccgcgaacaggtggtgacccgccgcaccaaattcctgctcaac
aaggcgcgcgaccgcgcccatgtgctggtcggcctcgccatcgcggtcgccaatatcgac
gagatcatccgggtgatccgcacctcgcccgatcccgccaccgcgcgcgacaccttgatg
gcgcgcgattgggaggccaaggacgtcgcggcgatgatcacgctgatcgacgatccgcgg
catcggctgaatgccgacggcaccgcgcggctgtcgttcgagcaggccaaggcgatcctc
gatctgcggctggcgcgcctgaccgcgttgggccgcgaggaaatttccgaagagctcgac
aagctggcgatcgagatcgccgactacctggagatcttgcggtcccgtgctcgggtgcag
accatcatcaaggaagaacttgcggcggtgaaggcggaattcgccacgccgcgcaagacc
accatcatcgagcaggaaggcgaggtcgaagacgaagacctgatccagcgcgaggacatg
gtggtgacggtgtcgcacgccggctacgtcaagcgggtgccgctgtcgacctatcgggcg
cagcgccgcggcggcaagggccgctccggcatgcagacccgcgaggaggactttgtcagc
cggctgttcgtcgcctcgacgcatacgccggtgctgttcttctcgtcgcgcggccaggtc
tacaaggaaaaggtctggcggttgccgatcgcgccgccgaacggccgcggcaaggccttg
atcaacatcctgccgctggagcagggcgagcgcatcaccaccatcatgccgctgccggag
gatgaatcctcctgggccgagctcgacgtgatgttcgccaccactcgcggcaccgtccgc
cgcaacaagctgtcggacttcgtcgatgtgcgccgttccggcatcatcgcgatgaagctg
gacgagggcgaggcgatcgtcgacgttcagatctgcaccgatcgcgacgacgtgctgctg
accgccgccggcggccagtgcatccgtttcgcggtgaccgacgtccgcgtgttccagagc
cgcgcctcgatgggcgtgcgcggcatggcgctcgccaatggcgatcaggtgatctcgctg
accatcctgcggcatttcgatgccaacccggccgaacgctccacctatctgaagcaatcc
ggcgcgattcgccgcgccgccaccggcgaagaggccgaggcggtcgagggcagcgaattg
gcggcggaagtcgccgacgccgagccggaggaggtcgacgcgatcgcctcgctcagtccg
gatcgctacgccgagatgtcggctaacgagcagttcgtgctgacgctgagcgagaacggt
ttcggcaagcggacctcgtcgttcgagtaccgcaccaccggccgcggcggcaaaggcatc
gtcgcgatggcggtgaacgcgcgcaacggcaagctggtggcctcgttcccggtggaggag
gaagatcagatcatgctggtgaccgacaaggggcaattgatccgctgcccggtcggcggc
atccgcatcgtcggccgctccacccagggcgtcacggtgttcaacaccgccgaggacgag
cacgtggtctcggtcgagcgcatcggtgaagacaccgagaacggcaacggcaacggccat
gacaacgggcaggacggcggctga
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