Rhodopseudomonas palustris BisB18: RPC_3090
Help
Entry
RPC_3090 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00010
Glycolysis / Gluconeogenesis
rpc00620
Pyruvate metabolism
rpc00630
Glyoxylate and dicarboxylate metabolism
rpc00640
Propanoate metabolism
rpc00680
Methane metabolism
rpc00720
Other carbon fixation pathways
rpc01100
Metabolic pathways
rpc01110
Biosynthesis of secondary metabolites
rpc01120
Microbial metabolism in diverse environments
rpc01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
RPC_3090
00620 Pyruvate metabolism
RPC_3090
00630 Glyoxylate and dicarboxylate metabolism
RPC_3090
00640 Propanoate metabolism
RPC_3090
09102 Energy metabolism
00720 Other carbon fixation pathways
RPC_3090
00680 Methane metabolism
RPC_3090
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_3090
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
RPC_3090
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
RPC_3090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD88632
UniProt:
Q212Q4
LinkDB
All DBs
Position
complement(3430379..3432109)
Genome browser
AA seq
576 aa
AA seq
DB search
MTTFKDARAFLLGQRTDYDTAVADFRWPDQAPFNWALDWFDAELAGDPASKDRTALWIVD
AASGGETRLSFAELSRRSNQTANFLRAQGLKRGDHLLLLLGNVVPLWEIMLAAIKLGLIV
IPATTLLTPDELRDRLERGRAKLVVAAPDQVAKFANLGGADLARVVVGEAQAGWLPFAQS
ADYPGSFAPDAPTDPDEPMLLYFTSGTTAKPKLVRHSQRSYPIGALSTMYWLGLQPGDVH
LNISSPGWAKHAWSCLFAPWNAGATVFVVNQPRFDAKSLLATVVRCGVTTLCAPPTVWRL
FIQEKLSDYKVALREVCGAGEPLNPEVIDQVKSAWGLTIRDGYGQTETTALAGNSPGQVV
KIGSMGRPLPGYQVIITDPDGKPAKEGEITLKLGADRPAGLMQGYQGEGGSLSGADGEVY
RSGDVAFADDEGYLTFVGRTDDVFKSSDYRISPFELESILLEHEAVAEAAVVPSPDPIRL
AIPKAYVMLAAGTEPSRDTALSIFRHLQARLSPFKRIRRIEMVTELPKTISGKIRRVHLR
RLERDDDRSDALRGHEFREEEFAELQSPRGAAPAEG
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttcaaagacgcaagggcgtttctgctggggcagcgcaccgattacgacacc
gcggtggcggatttccgttggcccgatcaggcgcccttcaactgggcgctggactggttc
gatgccgaactcgccggcgatcccgccagcaaagaccgcaccgcgctgtggatcgtcgac
gccgcgagcggcggcgagaccagattgtcgttcgcggagttgtcgcgacgctccaaccag
acggcgaatttcctgcgcgcgcaggggctcaagcgcggcgatcatctgttgctgctgctc
ggcaatgtggtgccgctgtgggagatcatgctggccgcgatcaagctcggcctcatcgtg
atcccggcgaccacgctgctgacgcccgacgaattgcgcgaccggctggagcgcggccgc
gccaagttggtggtggcggcgccggatcaggtggcgaaattcgccaacctcggcggcgcg
gatctcgcgcgcgtcgtggtcggcgaggcgcaagcgggctggctgccgtttgcgcaaagc
gcggactatcctgggagtttcgcgccggatgcgccgaccgacccggacgagccgatgctg
ttgtacttcacctccggcaccacggcgaaaccgaagctggtgcggcacagccaacgcagc
tatccgatcggcgcgctgtcgacgatgtattggctggggctgcagcccggcgacgtgcat
ctcaacatctcgtcgccgggctgggccaagcacgcctggagctgcctgttcgcgccgtgg
aatgcgggggccacggtgttcgtggtcaaccagccgcggttcgacgccaagagcctgctg
gcgacggtggtgcgctgcggcgtcaccacgctgtgcgcgccgccgacggtgtggcggctg
ttcattcaggagaaactctccgactataaggtggcgctgcgcgaagtctgcggcgccggc
gaaccgctcaatccggaagtgatcgatcaggtgaagtcggcctgggggctcaccatccgc
gacggctacggccagaccgagaccaccgcgctcgccggcaattcgccggggcaagtcgtg
aagatcggctcgatgggacggccgctgccgggctaccaggtgatcatcaccgatcccgac
ggcaaaccggcgaaagagggcgagatcaccttgaagctcggggccgatcgtcccgcgggc
ttgatgcaaggttatcagggcgagggcggcagcttgagcggcgccgacggcgaggtctat
cgcagcggcgacgtggcgttcgccgacgacgagggctatctcaccttcgtcggccgcacc
gacgacgtgttcaaatcctcggactatcggatcagcccgttcgaactggagagcatcctg
ctcgagcacgaggcggtcgccgaagccgcggtggtgccgtcgccggatccgattcgtctg
gcgattccgaaagcctatgtgatgctggcggccggcaccgagccgtcgcgcgacaccgcg
ctgtcgattttccgccatctgcaggcgcggctgtcgccgttcaagcggattcggcgcatc
gagatggtcaccgagctgccgaagacgatctccggaaagatccgccgcgtacatctgcgc
cggctggagcgcgacgacgaccgcagtgatgcgttgcgcggccacgaattccgcgaagaa
gaattcgccgagttgcaaagcccgcgcggcgccgcgccggcggaggggtag
DBGET
integrated database retrieval system
