Rhodopseudomonas palustris BisB18: RPC_3202
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Entry
RPC_3202 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00061
Fatty acid biosynthesis
rpc00071
Fatty acid degradation
rpc01100
Metabolic pathways
rpc01212
Fatty acid metabolism
rpc02024
Quorum sensing
rpc04146
Peroxisome
Module
rpc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPC_3202
00071 Fatty acid degradation
RPC_3202
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPC_3202
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_3202
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_3202
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_3202
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPC_3202
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPC_3202
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPC_3202
Exosomal proteins of breast cancer cells
RPC_3202
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABD88744
UniProt:
Q212E2
LinkDB
All DBs
Position
complement(3545333..3546934)
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AA seq
533 aa
AA seq
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MSDLAATGGVSGPGRIGRVAIGDLLKKAAVRFADRVALSDGERRVSFAELERDANRFANY
LVSRGLRPGSKISTICNNSVEFVKALFGIHRAGLVWVPINTMLGPADMDYILDHAEVNLA
LIDDNLHAQPERRAALEKRGIDLVTIDLTGKAKAAGLASFGELIEGQSDAEPEIDFDDRD
LAMIIYTSGTTSRPKGAMHCHLAVVMAVMSNCIEMKLGRDDGITGQFPIFHCAGHVLLLS
YLAVGGRMALMRGFDPMVCMEAIQRDKLTVFVGLSLMYQAILDHPRRNDYDLSSLRMCIY
TMAPMGRPLLERGIRELCPNFALTSGQTEMYPATTMSQPDRQLERFGNYWGESLIVNETA
IMDEEGRLLPRGEIGELVHRGPNVMMGYYKDPEATAAARKFGWHHTGDLALIDANGEVLF
LDRKKDMIKSGGENVASVRIEETLLAHPAVQNAAVVGLPHPQWGEAVSAFVKLKPGAAAS
EAEIAEHCKAHLGGFQVPKLIRIVEDMPMTATGKLRKVELRNRFADFFATERA
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatcttgcagccactggcggcgtttccgggcccgggcgtatcggccgggtggcg
atcggcgatctgctgaagaaggccgcggtgcgcttcgccgatcgcgtcgcactgagcgat
ggcgagcgccgcgtcagcttcgccgagttggaacgcgacgccaaccgcttcgccaactat
ctggtgtcgcgcgggttgcggcccggcagcaagatctcgacgatttgcaacaactcggtg
gaattcgtcaaagcgctgttcgggattcaccgcgctggcctggtttgggtgccgatcaac
accatgctggggccggcggatatggactacatcctggaccacgccgaggtgaacctcgcg
ctgatcgacgacaatctgcacgcccagccggagcgccgcgccgcactcgaaaagcgcggc
atcgatctggtcacgatcgatctcaccggcaaggcgaaggccgccggactcgccagcttc
ggcgagttgatcgaggggcaatccgacgccgagccggagatcgatttcgacgaccgcgat
ctggcgatgatcatctacacctccggcaccacttcgcggccgaagggtgcgatgcattgc
cacctcgcggtggtgatggcggtgatgagcaactgcatcgaaatgaaactcggccgcgac
gacggcatcaccggccagtttccgatctttcactgcgccggccatgtgctgctgttgagc
tatcttgcggtcggcggccggatggcgctgatgcgcggtttcgatcccatggtctgcatg
gaggcgatccagcgcgacaagctcacggtgtttgtcggcctgtcgctgatgtatcaggcg
attctcgatcatccccgccgcaacgactacgacctgtcgagcctgcggatgtgcatctac
accatggcgccgatggggcggccgctgctggagcgcggcatcagggagctgtgtccgaac
ttcgcgctgacgtcgggacagaccgagatgtatccggcgaccacgatgtcgcagccggac
cgtcagctcgagcggttcggcaattattggggcgaatcgctgatcgtcaacgagaccgcg
atcatggacgaggaggggcgtctgctgccgcgcggcgagatcggcgaattggtgcatcgc
ggccccaacgtgatgatgggctactacaaggatcccgaggccaccgccgccgcgcgcaag
ttcggctggcatcacaccggcgatctggcgctgatcgacgcgaacggcgaggtgctgttc
ctcgaccgcaagaaagacatgatcaagtccggcggcgagaacgtcgcctcggtgaggatc
gaggagacgctgctggcgcatcccgcggtgcagaacgccgctgtggtcggattgccgcat
ccgcaatggggcgaggcggtgtcggccttcgtgaagttgaagccgggcgccgcggccagc
gaggccgagatcgccgagcattgcaaggcccatctcggcggcttccaggtgccgaagctg
atccggatcgtcgaggacatgccgatgaccgccaccggcaagctgcgcaaggtcgaactg
cgcaaccggtttgccgacttctttgcgacggagcgggcgtga
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