Rhodopseudomonas palustris BisB18: RPC_3356
Help
Entry
RPC_3356 CDS
T00336
Name
(GenBank) Deoxyribodipyrimidine photo-lyase type I
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_3356
Enzymes [BR:
rpc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RPC_3356
DNA repair and recombination proteins [BR:
rpc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RPC_3356
Prokaryotic type
RPC_3356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABD88897
UniProt:
Q211N9
LinkDB
All DBs
Position
3710243..3711694
Genome browser
AA seq
483 aa
AA seq
DB search
MANAPAPISLVWFRDDLRLSDHPALDDAGRSGAAVVCLYVLDEESAGLRPLGGAARWWLA
QSLRSLSADLAARGGVLILRRGPAARIVAEVAREAGAVRVSWNDVPNRPARAVADDLAAR
LGDLGVAAQCCPGDLLAAPATVRTQQGRGLRVFTPFWKRVLALGDPPQPLTAPKALCSVP
SLASDTLDDWKLEPTRPDWAGGLRARWQPGEAAAQRGLQHFLHGAIAGYATERDRPDRVA
TSTLSPHLRFGEISPRQVWHAARFAAAERPAIAADVDKFLSELGWREFCRHLLFDNPDLA
TRNLQPAFDRFPWTTDPIALRAWQRGRTGYPLVDAGMRELRLTGVMHNRVRMVAASFLVK
HLLLDWRCGEAWFWDTLVDADPASNPANWQWVAGCGADAAPYFRVFNPILQGERFDAEGD
YVRRFIPEIAGLSNKSIHQPWTATPLELEAAGVTLGDTYPNPIVDHRAARQRALAAYATV
RNN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgcccctgcgccgatctcgctggtctggtttcgcgacgacctgcgattgtcc
gaccaccccgcactcgacgacgccgggcgaagcggcgcggcggtcgtgtgcctctacgtg
ctcgacgaagagagcgccggactgcggccgctcggcggcgccgcgcgctggtggctggcg
caatcgctgcgcagcctcagcgccgacctcgccgcgcgcggcggcgtgctgatcctgcgg
cgcggccccgccgcccggatcgtcgccgaggtcgcgcgcgaggccggcgccgttcgcgtc
agttggaatgacgtcccgaaccggcccgcccgcgccgttgccgacgacctcgccgcgcgg
ctcggcgatctcggcgtcgccgcgcaatgctgccccggcgatctgttggcggcgccggcg
acggtccgaacgcagcaaggccgcggcctcagggtgttcacgccgttctggaaacgggtg
cttgcgcttggcgatccgccgcaaccgctaaccgcaccgaaagctctctgctctgtccca
agcctcgccagcgacaccctcgatgactggaagctcgagccgacccggccggattgggcc
ggcggtttgcgcgcgcgctggcagcctggcgaagcggccgcgcaacgcggcctgcaacac
ttcctccacggcgccatcgcgggctacgccaccgagcgcgaccgccccgaccgcgtcgcc
acctcgacgctgtcgccgcatctgcgctttggcgaaatcagtccgcggcaggtctggcac
gcggcacggttcgcagcagccgagcgcccggcgattgccgccgacgtcgacaagtttctt
agcgagttgggatggcgggaattctgccggcacctgctgttcgacaacccggaccttgcg
acccgcaacctgcagccggcgttcgatcgctttccctggaccaccgacccgatcgcgttg
cgcgcctggcagcgaggccgcaccggctatccccttgtcgacgccggaatgcgcgaactc
cggctcaccggagtgatgcacaaccgcgtgcgcatggtggcggcgtcgttcctggtcaag
catctgttgctcgactggcgctgcggcgaagcctggttctgggacacgctggtcgatgcc
gatcccgccagcaacccggcgaattggcagtgggtcgccggctgcggcgccgatgccgca
ccgtatttcagggtgttcaatccgatcctacaaggcgagaggttcgatgccgagggcgac
tatgttcgccgcttcatcccggaaatcgccggtctttcgaacaagtcgatccatcagcca
tggactgcgacgccgctcgaactcgaagccgccggcgtcacgctcggtgacacctatccg
aacccgatcgtcgatcaccgcgccgcgcgacagcgtgcacttgccgcatacgcgactgtg
cgaaacaactga
DBGET
integrated database retrieval system
