Rhodopseudomonas palustris BisB18: RPC_3403
Help
Entry
RPC_3403 CDS
T00336
Name
(GenBank) ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpc03009
]
RPC_3403
Enzymes [BR:
rpc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
RPC_3403
Ribosome biogenesis [BR:
rpc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RPC_3403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABD88943
UniProt:
Q211J3
LinkDB
All DBs
Position
complement(3786650..3788155)
Genome browser
AA seq
501 aa
AA seq
DB search
MSKRPPRERSTERTERPQRSERAFGERPPRGERAERPQRAERSFAERSDRPQRTERSERP
QRAERSERAFGDRPQRAERAERSFGERPAKSDRSRSERPQRADRPTADRPQRAERSDRPR
SDRAERSERPANFRPGSKPPRVPPRTPRPEPRQTPHIEEPEKPVVPDVPLPTKVETVVVS
ADENNMRVDRFLEARYPGLSFSHIQRIVRKGELRVDGKRADSKDRLEEGQTVRIPPLKLD
APKVGTGNLSEAEQKTMAALRAMILYEDADVMVLNKPAGLAVQGGSGTTRHVDLMLEVMR
DAKGQKPRLVHRLDKETAGCLLIAKTRFAATALTGAFRERSARKVYWALVAGVPKPKQGR
ISTYLAKEESEDDTIMRIAEHGDEGASHAVTYYAVVETSASKLAWVSLKPVTGRTHQLRA
HMAHIGHAIVGDPKYFNIENWQLPGGLQNRLHLLARRIVIPHPRGGTIDVSAPLPPHMLQ
SWNLLGLEHDRFDPIENAPEE
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcgcccgccgcgcgagcgctccaccgagcgcaccgagcgcccgcaacgcagc
gagcgggccttcggggagcgcccgccgcgcggcgagcgtgccgagcgcccgcagcgcgcc
gagcgatcatttgccgaacgctccgatcgcccgcaacgcactgagcgttccgaacggccg
caacgcgctgaacgttcagagcgggctttcggcgaccgcccgcaacgcgccgagcgcgcc
gagcgatcgttcggcgagcgccccgccaaatccgatcgttcgcggtcggagcggccgcaa
cgcgccgatcgccccaccgcggatcgtccgcagcgcgccgagcgatccgatcggccgcga
tccgatcgcgccgagcgttccgaacgcccggcaaatttccgccccggcagcaaaccgccg
cgcgtgccgccgcgcacgcctcgccccgagccgcgccaaacgccgcacatcgaggaaccc
gagaagccggtggtgccggacgtgccgttgccgaccaaggtcgagaccgtggtggtgtcg
gccgacgagaacaacatgcgggtcgatcgctttctcgaggcgcgctatccggggctatcg
ttctcccacatccagcgcatcgtccgcaaaggcgagctgcgcgtcgacggcaagcgcgcc
gacagcaaggaccggctggaagaaggccagaccgtgcggattccgccgctcaagctcgac
gcgccgaaggtcggcaccggcaatctgtccgaagccgagcagaagaccatggcggcgttg
cgggcgatgatcctctatgaggacgccgacgtcatggtgctgaacaagccggccgggctc
gcggtgcagggcggaagcggcaccacgcgccacgtcgacctgatgctggaggtgatgcgc
gacgccaagggccagaagccgcgcctggtgcatcggctggacaaggagaccgccggctgt
ctgctgatcgccaaaacccgctttgccgccaccgccttgaccggcgcgttccgcgaacgc
tcggcgcgcaaagtctattgggcgctggtcgccggcgtgccgaagccgaagcagggccgc
atctcgacctacctcgccaaggaagagagcgaagacgacaccatcatgcggatcgccgag
catggcgacgagggcgccagccacgcggtgacctactacgcggtggtagagacctcggcg
agcaagctcgcctgggtgtcgctgaagccggtgaccgggcgcacccatcagctgcgcgcc
catatggcgcatatcggccacgccatcgtcggcgatccgaagtacttcaacatcgagaac
tggcaattgcccggcgggctgcagaaccggctgcacctgttggcacgccgcatcgtgatt
ccgcatccgcgcggcggcaccatcgacgtcagcgcgccgctgccgccgcatatgctgcaa
tcctggaacctgctcgggctggaacacgaccgcttcgatccgatcgaaaacgccccggag
gagtaa
DBGET
integrated database retrieval system
