Rhodopseudomonas palustris BisB18: RPC_3424
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Entry
RPC_3424 CDS
T00336
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RPC_3424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpc03021
]
RPC_3424
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_3424
Enzymes [BR:
rpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RPC_3424
Transcription machinery [BR:
rpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RPC_3424
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RPC_3424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
DUF4249
IDH
Motif
Other DBs
NCBI-ProteinID:
ABD88964
UniProt:
Q211H2
LinkDB
All DBs
Position
complement(3810682..3811701)
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AA seq
339 aa
AA seq
DB search
MTIQKNWQELIRPNKLVVTPGSDPTRFATLVAEPLERGFGQTLGNALRRVLLSSLQGAAV
QSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGTVTAGDIQ
TVGDVVVLNPDLQICTLDEGAEIRMEFTVAGGKGYVAAERNRPEDAPIGLIPVDSLFSPV
RKVSYKVENTREGQILDYDKLTMTIETNGAISPDDAVAYAARILQDQLNVFVNFEEPRKE
VTQEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatccagaaaaattggcaagaactgattcggccgaacaagctcgtggtcacgccg
ggctccgacccgacgcgttttgcgaccctcgttgccgaaccgctcgagcgcggcttcggc
cagacgctgggcaacgcgctgcggcgcgtgctgctgtcatcgctgcagggtgccgcggtg
cagtcggttcatatcgacggcgtgctgcatgagttctcctcgatcgccggcgtgcgcgaa
gacgttaccgacatcgtgctgaacattaaggacatctcgatcaagatgcagggcgaaggc
ccgaagcgcatggtcgtgaagaagcagggtcccggcaccgtcaccgccggcgacatccag
accgtcggcgacgtcgtggtgctcaatccggacttgcagatctgcacgctggacgagggc
gccgagatccgcatggaattcaccgtggccggcggcaagggctacgtcgccgccgagcgc
aaccgtcccgaggacgcgccgatcggcctgatcccggtcgacagcctgttctccccggtg
cgcaaggtctcctacaaggtcgagaacacccgcgagggccagatcctcgactacgacaaa
ttgaccatgacgatcgagaccaacggcgcgatctcgccggacgacgcggtggcctatgcc
gcccgcatcctgcaggatcagctcaacgtgttcgtcaacttcgaagagccgcgcaaggaa
gtcacccaggagatcatcccggatctggcgttcaacccggcgttcctcaagaaggtcgac
gagttggagttgtcggtgcgttcggcgaactgcctgaagaacgataacatcgtctatatc
ggcgacctggtgcagaagtcggaagcggaaatgctgcgcaccccgaacttcggccgcaag
tcgctcaacgagatcaaggaagtgctggcccagatgggtctgcatctcggcatggaagtg
ccgggctggccgccggaaaacatcgacgaattggccaagcgcttcgaggatcattactga
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