Rhodopseudomonas palustris BisB18: RPC_3566
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Entry
RPC_3566 CDS
T00336
Name
(GenBank) probably methylase/helicase
KO
K26273
protein strawberry notch
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpc03036
]
RPC_3566
Chromosome and associated proteins [BR:
rpc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RPC_3566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
HisG
MTS
Motif
Other DBs
NCBI-ProteinID:
ABD89105
UniProt:
Q210T1
LinkDB
All DBs
Position
complement(3962070..3966437)
Genome browser
AA seq
1455 aa
AA seq
DB search
MIPSSSSTAMRLSASLASGDAAARIVAAAGLIVAQLERGRRIDAAGLRAAMETAFAGSDA
DGAWDWKSAYDACEAATVLFLRKFGPAMRARAASSDAMLPMLAKIARLLPTHTRRSEESQ
ALQQFSSPIGLGLAASTAAAITPSDVVLEPSAGTGLLAILAELSGATLALNELAETRAGL
LELLFRDVSVTRFDAAQIDDHLGIGITPSVVLMNPPFSALANVDRRMGDAALRHISSALA
RLADGGRLVTITGASCAPDNPSWRDAFVDLQQRGQVVFSAAVDGAVYARHGTTMETRLTV
IDKRGADDPRVFPASLGVAPDVVTLLRWIKESVPPRLPVSLPLAVHSIGRPMPSVGRAQQ
PVVKRPSSFPAKLPQPDAIELAYQTVDWKPIEGGGITDALYEACSLQSIRIPGAKAHPTK
LVQSAAMASVAPPKPSYHPHLPAEVVERGLLSDAQLETVIYAGEAHSQFLAGSWSVDPTL
DIVAAARDHAETSVRFRSGFMLGDGTGAGKGRQVAGILLDNWLKGRRKAVWISKSDKLIE
DAQRDWSALGQERLLVTPLSHFRQGTPIRLEQGILFTTYATLRSDARDDKISRVRQIVEW
LGDNSGSETEAGFDGVIIFDESHAMQNAAGGKGERGDQAASQQGRAGLRLQHALPNARIV
YVSATGATTVHNLAYAQRLGLWGGDDFPFATRAEFVEAIEGGGVAAMEVLARDLKALGLY
TARSLSYEGVEYQLVEHRLTEEQIRIYDGYAGAFSIIHNNLDAALRAANVTGTTGALNAQ
AKSAARSAFESAKQRFFNHLITAMKVPSLIASVERDLNDGHAAVIQIVSTGEALMERRLA
EIPTEEWGDVQIDITPREYVLDYLSHSFPTQLYEPFTDSEGNLSSRPVFRDGQPVQCRDA
VVRRDRLIEHLASLPAVHGALDQIVQRFGSDMVAEVTGRSRRIIRKTGPNVVDCLKVENR
AGSANLGEAQAFMDDLKRILVFSEAGGTGRSYHAELSAKNRRLRVHYLLEAGWKADAAIQ
GLGRTNRTNQAQPPLFRPIATDVKAEKRFLSTIARRLDTLGAITKGQRQTGGQGLFRAED
NLESHYARDALRQLYLRLVNGKIVDCSLQAFEDATGLKLTDSKGIKDELPPITTFLNRLL
ALTIDLQNILFAAFEQLLTARVEGAIASGTFDAGLETLTAESFTVTDRQTIYTHPGTLAE
TRLLTITQRDRNRPVTLDEALQRLADPRAQCLVNAQSGRAAVQVPARSIMLDDGEVERRV
RLIRPMEHPTLPLALMPQTHWQETDRETFAHAWEAELAEVPEFTSTEIHIVTGLLLPIWK
RLPNESTRVYRLQTDVGERIVGRKVSAAWAATATETGISTITPDAAFAALLDGKTIIDLA
ESLQLRRARVMGVNRIELAGFTEAMRDRLRAYGLFSEIVSWKLRFFVPLDATGTAVLAKV
LEHYPVLRISDRAAA
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atgatcccatcttcttcctccacggccatgcgattatcagcgtcgctggccagcggcgat
gccgccgcgcgcatcgtggccgcagcgggattgatcgttgcgcaactggagcgcggccgc
cgcattgatgcggctggcctccgcgccgcgatggaaacagcctttgccggttcggacgct
gatggcgcctgggattggaagagcgcctatgatgcctgtgaggccgcgaccgtcctgttc
ctgcgcaaattcggcccggcgatgcgcgcacgtgccgcgtcgtccgacgccatgcttccg
atgctggcgaagattgcgcgccttcttccaacccatacgcgacgatccgaagaaagccag
gcgctgcagcaattcagctcgccgatcgggctcggactggcagcttccaccgctgcggca
atcaccccctccgacgtcgtactcgagccgtcggccgggaccgggctgctcgccattctc
gccgaattgtccggcgcgacactcgctctgaacgaactggccgagacccgtgctggcttg
ctcgagctgttgttccgcgacgtctccgtcacccgcttcgacgccgcgcagatcgacgat
catctcggcattggcatcacgcccagcgtcgtgctgatgaacccgccattttccgcactc
gccaatgtcgatcgccggatgggcgacgctgcgttgcgccatatctcgtcggcactggcg
cggctggccgatggcgggcgcctcgtcaccatcaccggcgccagttgtgcacccgataac
ccgtcgtggcgcgacgcctttgtcgacctgcagcagcgcgggcaggtggtgttctccgcg
gcggtcgatggtgcggtctacgcccgacacggcaccacgatggagacccgcctgaccgtg
atcgacaagcggggggcggacgaccccagggtatttccggcatcactaggcgtggcgccc
gacgttgtcacgctactccgctggataaaagaatctgtgccacctcggttgccggtctcg
ctcccgctggcagtccattcgatcggccgaccgatgccaagcgtcggccgcgcacagcag
cccgtcgtcaaaaggccttcctccttcccggctaagctaccccagccagacgcgattgag
ctcgcctatcagacggtcgactggaagccgatcgagggcggcggcatcaccgatgcgctc
tatgaagcctgcagcttgcagtcgatccggattcccggcgccaaggcgcatcccaccaag
ctggtgcagtcggcggcaatggcctctgtggcgccaccgaagccgagctatcacccgcat
ctgcctgcagaggtcgtcgaacgcggtctgttgtcggatgctcagctggaaaccgtaatc
tatgccggggaagcccattctcagttcctggctgggtcttggagcgttgacccgacgctc
gacatcgtcgccgccgcgcgtgatcacgccgagacctcggttcgatttcgctcaggcttc
atgctcggcgacggcaccggtgccggcaagggccgccaggtcgccggcatcctgctcgac
aattggttgaagggacggcgcaaggcggtctggatttccaagtccgacaagctgatcgag
gatgcccagcgcgactggtcggcgctcggacaggaacggttgctggtgacaccgctgtcg
catttccggcaaggcaccccgatccgtctcgagcaaggcatccttttcaccacctatgcc
acgctgcgctccgacgcccgcgacgacaagatatcacgcgtccggcagatcgtggaatgg
ttgggcgacaattctggctctgagaccgaggcgggtttcgacggcgtaatcatcttcgac
gagtcccacgcgatgcagaatgctgcaggcggcaaaggcgaacgcggcgaccaggctgcc
tcgcagcagggtcgcgccggtcttcgcctgcaacacgcgcttcccaacgcgcgcatcgtc
tatgtctcggcgaccggcgccaccacggttcataacctcgcctatgcgcagcgcctcggc
ctttggggcggcgacgattttcccttcgccacccgcgcggaatttgtcgaggcaatcgag
ggcggcggcgtggcggcgatggaggtgctggcccgcgatctcaaggcgctcgggctctat
acggcgcggtcgctttcttacgagggggtggagtaccaactggtcgagcaccggctcacc
gaggaacagatccggatctatgacggctatgctggtgcgttctcgatcatccacaacaac
ctcgatgccgcgctgcgcgccgccaacgtcaccgggaccaccggcgcgctgaacgcgcag
gccaagtccgcggcgagatccgcattcgaatctgccaagcagcggttcttcaaccacctc
atcaccgcgatgaaggtgccgtcgctgatcgcctcggtcgagcgcgatctgaacgatggc
catgccgccgtcatccagattgtctccaccggcgaggcgctgatggagcgccggcttgcc
gagatcccgaccgaggaatggggtgacgtccagatcgacatcacgccgcgggaatatgtg
ctggattatctcagccattcgttcccgacccagctctacgagccgttcaccgacagcgaa
ggcaatttgtcgtcgcggccagtgttccgggatggccaaccggtgcaatgccgggacgcc
gtcgtgcggcgcgaccggttgatcgagcatctcgcctcattgccggcggtacacggcgcg
ctcgatcagatcgtgcagcgctttggctccgacatggtcgcggaagtgaccggacgctcc
cggcgcatcatccgcaagaccggcccgaatgtcgttgattgcctcaaagtggagaaccgc
gccggctccgccaatctcggcgaggctcaggcgttcatggacgacctcaagcgcattctg
gtgttctcggaagccggcggcaccgggcgctcctatcacgcagagctctcagccaagaac
cggcggctgcgcgtgcactatctgctggaagctggatggaaggccgatgctgcgatccag
gggcttggccgcaccaaccgcaccaatcaggcgcagcctccattgtttcggccgatcgcg
accgatgtgaaggccgagaagcgttttctttcgaccatcgcgcgccggctcgacacgctc
ggtgccatcaccaaaggccagcgccagaccggcgggcagggcctgttccgcgccgaggac
aaccttgaaagccactatgcccgcgacgccctgcggcaactctatctgcggctggtcaac
ggcaagatcgtcgattgttcgctgcaagcgttcgaggacgccaccgggctgaagctgacc
gatagcaaaggcatcaaggacgagctgccgccgatcaccactttcctcaaccggctgctg
gcgctgacgatcgatctgcagaacattctgtttgcggccttcgagcaactgctgaccgcg
cgcgtcgagggcgcgatcgcgtccggcacctttgatgccggcctggaaaccctgaccgcc
gaaagcttcacggtcactgaccggcagacgatctacacccatcccggcaccttagccgag
acccgtttgctcacgatcacccagcgcgaccgcaaccgaccggtcacgctcgacgaggcg
ctacagcgtctcgccgatccacgtgcgcaatgtctggtcaacgcccagtccggtcgcgcc
gccgtgcaggttccggcgcgtagcatcatgctggatgacggcgaggtggaacgaagagtt
cgtctgatccggccgatggagcatccgacgttgcctctcgcgttgatgccgcagacccat
tggcaagagaccgaccgcgagacctttgcgcacgcctgggaagctgaactggctgaggtg
ccggagttcacctcaaccgaaatccacatcgtgaccggtttactgctgccgatctggaag
cggttgccgaatgaatcgacgcgggtctaccggctgcagaccgacgtcggggagcgcatc
gtcggccgcaaggtgtcggcggcttgggcggctaccgcgaccgagacgggcatctcgacc
atcacccccgacgctgcgttcgcggcgttgctcgatggcaagacgatcattgatcttgcg
gaatccctgcagctgcgccgggctcgcgtaatgggcgtgaaccggatcgaattggccggc
ttcaccgaggcgatgcgcgaccgtcttcgcgcctatggactgttcagcgagatcgtctcc
tggaagctgcgcttcttcgtgccgctggatgcgaccggcacggcggtgctggccaaagtg
ctggagcactatccggtgctgcggatctccgatcgggctgcggcgtga
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