Rhodopseudomonas palustris BisB18: RPC_3626
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Entry
RPC_3626 CDS
T00336
Name
(GenBank) Glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00500
Starch and sucrose metabolism
rpc01100
Metabolic pathways
rpc01110
Biosynthesis of secondary metabolites
Module
rpc_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RPC_3626
Enzymes [BR:
rpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RPC_3626
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
GlgX_C
Glyco_hydro_31_2nd
hDGE_amylase
Motif
Other DBs
NCBI-ProteinID:
ABD89161
UniProt:
Q210M5
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All DBs
Position
4032304..4034409
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AA seq
701 aa
AA seq
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MSKQTVGEGLPFPLGASWDGKGTNFALFSAHATKVEICLFDGDQERRYELPEYTDEIFHG
YLPDVGPGCFYGYRVYGPYEPENGHRFNPNKLLLDPYARAHAGEMKWDPAVFGYTMESGD
DRTFDTRDSAPFVPKCVVVDPNYDWKGEPGRRNTPWDQTVIYEAHVKGFTKLHPDVPEHL
RGTYAGFGSQPIIDHIASLGVSAVELLPIHTFINDDNLLDKGLTNYWGYNTIGFFAPDPR
YASDVPNSLREFKEMVARLHSGGLEVILDVVYNHTAEGSELGPTLSFKGIDNASYYRLLP
DKKRYYINDTGTGNTVNLSNPRVIQMVADSLRYWSNEMHIDGFRFDLGTILAREVYGFDE
QSGFLKAVDQDPVLTSVKLIAEPWDIGPGGYQVGGFPPGWAEWNDKFRDTARDFWRGEAD
VATLVPRLSGSGDLFNHQGRRAWASINFVTAHDGFTLNDWASYNDKHNEANGEENRDGSS
SNRSWNCGVEGPTEDKDILALRERQKRNMLGTLLLSQGTPMLLAGDEFARTQHGNNNAYC
QDSEISWIDWNLGDDAKDLLSFTKRLIELRKAYPTLRRSRFLTGQHDPQLDVCDVIWINA
NGAPMQDEQWQDTTMKSFGMLLDGRAQKTGIRKHGEDETVLLVMNSFDGVVDFILPETPH
GSKWALLIDSNIPDGAPGAEFPCGAMYQVTGRSLLLFTLGM
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaacaaactgtcggcgaaggccttcccttcccgctgggtgccagttgggacggc
aagggaacgaatttcgcgctgttctcggcgcatgccaccaaggtggagatctgcctattc
gacggcgatcaggaacgccgctacgaactgccggaatataccgacgagatcttccacggc
tatctgcccgacgtcggccccggttgcttctatggctaccgggtctacggcccttacgag
ccggaaaacggccaccgcttcaacccaaacaagctgttgctcgacccttacgcccgcgcc
catgccggcgagatgaaatgggatccggcggtgttcggctacacgatggaaagcggcgac
gaccgcaccttcgacacccgcgacagcgcgccgttcgtgccgaaatgcgtggtggtcgat
ccgaattacgactggaagggtgagcccggccgacgcaatacgccgtgggatcagaccgtg
atctacgaggcccacgtcaagggcttcacgaagctgcatcccgacgtccccgagcatctg
cgcggcacctatgcgggcttcggcagccagccgatcatcgatcacatcgcttcgttgggc
gtcagcgcggtcgagctgttgccgatccacaccttcatcaacgacgataatctgctcgac
aaggggctgaccaattattggggctacaacaccatcggcttcttcgcccccgacccgcgc
tacgcctccgacgtgcccaacagcctgcgcgaattcaaggagatggtggcgcggctgcat
agcggcggcctcgaggtgatcctcgacgtggtctataaccacaccgccgagggcagcgag
cttggcccgacgctgtcgttcaagggcatcgacaacgccagctactatcggcttctgccg
gacaagaagcgctactacatcaacgacaccggcaccggcaacaccgtcaacctgtcgaat
ccgcgggtaatccagatggtcgccgactcgttgcgctactggtcgaacgagatgcacatc
gacggcttccgcttcgacctcggcaccattctggcccgcgaggtctacggcttcgacgag
cagagcggatttctcaaggcagtcgatcaggatccggtgctgacctcggtcaagctgatc
gccgaaccctgggacatcggccccggcggctaccaggtcggcggcttcccgccgggctgg
gcggaatggaacgacaaattccgcgacaccgcgcgcgatttctggcgcggcgaagccgac
gtcgcgacgctggtgccgcggctgtcgggctcgggcgatctgttcaaccatcagggccgt
cgcgcctgggccagcatcaacttcgtcaccgcgcacgacggcttcacgctgaacgattgg
gcgagctacaacgacaagcacaacgaggccaatggcgaggagaatcgcgacggctcgtcg
tcgaaccgctcctggaactgcggcgtcgaaggcccgaccgaggacaaggacatcctggcg
ctacgcgaacgccagaagcgcaacatgctcggcacgctgctgctgtcgcagggcacgccg
atgttgctggcgggcgacgaattcgcccgcacccaacacggcaacaacaatgcctattgc
caggacagcgagatctcatggatcgattggaacttgggcgacgacgccaaggatctgttg
agcttcaccaagcggttgatcgagctgcgcaaggcctatccgacgctgcgccgcagccgg
ttcctgaccggccagcacgatccgcaactcgacgtctgcgacgtgatctggatcaacgcc
aatggtgcgccgatgcaggacgagcagtggcaagacaccacgatgaagagcttcggaatg
ctgctcgacggccgcgcgcaaaagaccggcatccgcaagcacggcgaggacgagaccgtg
ctgttggtgatgaattcgttcgacggcgtggtagacttcatcctgccggagacgccgcat
ggcagcaaatgggcgctgctgatcgacagcaacattcccgacggcgcgccgggcgcggaa
tttccgtgcggggcgatgtatcaggtcaccgggcgttcgctgctgctgttcacgctcggc
atgtga
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