Rhodopseudomonas palustris BisB18: RPC_3681
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Entry
RPC_3681 CDS
T00336
Name
(GenBank) Glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00500
Starch and sucrose metabolism
rpc01100
Metabolic pathways
rpc01110
Biosynthesis of secondary metabolites
Module
rpc_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
RPC_3681
Enzymes [BR:
rpc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
RPC_3681
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
ABD89216
UniProt:
Q210H0
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All DBs
Position
4101900..4103978
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AA seq
692 aa
AA seq
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MRLSAGTSSRLGASWDGRGTNFALFSANAEKVELCLFDTQGRREIERITLPEKTEDVWHG
YLNDVSPGQLYGYRVTGPYEPERGHRFNAHKLLLDPYAKRLFGRLVWSDAHFAYRPGSPR
EDLSFDRRDNARGVPKAVVIDETFHLGRHDTRPLIRWEDTIIYEAHVKGLTQTHPDVPPH
LRGSYSALSSQPMIDHFKRLGVTTIELLPIHGLVDDRTLIEKKLTNYWGYNTLSFFAAEQ
RYTQDHPLDAFRTTVARLHDAGIEVILDVVYNHTAEGNHLGPTLSFRGIDNASYYWLKPE
NPRFYDDFTGCGSSVNLTHPRVLQMVMDSLRYWVETCHVDGFRFDLATTLARGPRGYDRN
AGFFTAIRQDPVLASVKMIAEPWDLGMGGYQVGAFPSQWSEWNDRYRSAMRRYWGGEGSL
TGEVSRRMTGSSDVFNHDGRRPRASINHVTVHDGFTLADLYSYNVKHNKANGEDNRDGSN
DNLSNNCGHEGPSPDPAIRALRLQLRKNQLACLMLAQGVPLLLAGDEVGNTQHGNNNAYC
QDNEIGWVGWEGLGQTSDDLTDFVGQLTTLRKNFPQIRSNQWLDGRRADGSYGVLWLTPG
ADEMTQQDWAFPDGRFLAYVLSPAEPGYAPLFIVLNSAPAAITFKFPKTPEWKVWRQVLN
TTDERAVIDPWPAGGETIAPPRSVLAFAGASA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtgcggttatcggccggcacgtcctcccgtctcggcgcaagctgggatggccgaggcacc
aacttcgcattgttctccgcgaacgcagagaaggtcgagctgtgtctgttcgacactcag
ggccggcgcgagatcgaacggatcacgctgcctgaaaagaccgaagacgtctggcacggc
tatctgaacgacgtctctccgggtcagttgtacggctatcgcgtgaccggcccctatgag
ccggagcgcggccaccgcttcaacgcccacaaattgctgctcgacccctacgccaaacgg
ctgttcggacgcctggtctggagcgacgcgcatttcgcctaccgcccgggcagtccgcgc
gaggatctgtcgttcgaccgccgcgacaacgcgcgcggcgtgccgaaggcggtcgtgatc
gacgaaactttccacttgggccgccacgacacccggccgctgatccgttgggaagacacc
atcatctacgaggcccatgtcaaaggcctgacgcagacccatcccgacgtgccgccgcat
ctgcgcggcagctacagtgcgctgtcgtcgcagccgatgatcgaccatttcaagcggctc
ggcgtcaccaccatcgagttgctgccgatccacggcctggtcgacgaccgcacgctgatc
gagaagaagctgacgaactactggggctacaacacgctgtcgttctttgccgccgaacag
cgctacacccaggaccacccgctcgacgcgttccgcaccacggtggcgcgactgcacgac
gccggcatcgaggtcattctcgacgtggtttacaaccacaccgccgagggcaatcacctc
ggtcccacgctgtcgttccgcggcatcgacaacgcctcgtactactggctgaagccggag
aatccgcggttctacgacgacttcaccggctgcggcagttcggtcaatctgacccatccg
cgggtgttgcagatggtgatggatagcctgcgctactgggtcgagacctgccacgtcgac
ggcttccgcttcgatctggcgaccacgctggcgcgcgggccgcgcggctacgatcgcaac
gccggattcttcaccgcgatccgccaggacccggtgctggcttcggtgaagatgatcgcc
gagccgtgggacctcggcatgggcggctatcaggttggcgcgtttccctcgcaatggtcg
gaatggaacgaccgctaccgcagcgcgatgcgacgctattggggcggcgaaggcagcctg
accggcgaagtatcgcggcgcatgaccggctcctccgacgtgttcaaccatgacggccgc
cggccccgcgccagcatcaaccacgtcacggtgcacgacggcttcaccctcgccgacctc
tacagctacaacgtcaagcacaacaaggccaacggcgaggacaatcgcgacggctccaac
gacaacctcagcaacaattgcggccacgaaggcccgagcccggatccggcgatccgggcg
ctgcggctgcagttgcgcaaaaaccaactggcctgcctgatgctagcgcagggcgtgccg
ttgctgctcgccggcgacgaggtcggcaacacccagcacggcaacaacaacgcctattgc
caggacaatgaaatcggctgggtcggctgggaagggctcggccagacgagcgacgacctc
accgacttcgtcggccaactcaccacgctgcgcaagaacttcccgcagatccgctccaat
cagtggctggacggccgccgcgccgacggctcttacggcgtgttgtggctgacccccggg
gccgacgaaatgacccagcaggactgggcgtttccggacggccggtttctggcttacgtg
ctcagccccgccgaaccgggctacgcgccgttgttcatcgtgctgaattcggcgcccgcg
gcgatcaccttcaaattccccaagaccccggaatggaaggtctggcggcaggtgctcaac
accaccgacgagcgcgcggtgatcgatccgtggccggccggcggcgagacgatcgccccg
ccccgctcggtgctggccttcgccggcgcatcggcttga
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