Rhodopseudomonas palustris BisB18: RPC_3771
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Entry
RPC_3771 CDS
T00336
Name
(GenBank) nickel-dependent hydrogenase, large subunit
KO
K06281
hydrogenase large subunit [EC:
1.12.99.6
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00633
Nitrotoluene degradation
rpc01120
Microbial metabolism in diverse environments
rpc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
RPC_3771
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPC_3771
Enzymes [BR:
rpc01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
RPC_3771
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Motif
Pfam:
NiFeSe_Hases
Motif
Other DBs
NCBI-ProteinID:
ABD89306
UniProt:
Q20ZY0
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All DBs
Position
complement(4191116..4192909)
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AA seq
597 aa
AA seq
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MTNITTPNGFKLDNAGRRVVVDPVTRIEGHLRVEVNVDANNVIRNAVSTGTMWRGIEVIL
RGRDPRDAWAFTERICGVCTGTHALTSVRAVENALDIKIPENANTIRNIMQLTLQVHDHI
VHFYHLHALDWVDIVSALSADPKATSTLAQSISNWPLSSPGYFKDLQTRLKKFVESGQLG
PFKNGYWGHPAYKLPPEANLMAVAHYLEALDFQKDMVKIHTVYGGKNPHPNWLVGGVPCA
INVDGVGAVGAVNMERLNLVSSIIDQMVTFTEQVYLPDLQAIASFYKDWTFGGGLSSTSV
MSYGDIPEYANDYSAASLKMPRGVILNGNLNEVLPVDLADPSQVQEFVTHSWYKYPDETK
GLHPWDGVTVPHYELGPKSKGTKTRIEAVDEEAKYSWIKSPRWKGNAVEVGPLARYIVGY
AQNKPEFKEPTEKLLKDLGLPVTALFSTLGRTAARALEAQWAAHQLRYFQNKLMASLKAG
DSATANVEKWSPETWPKEVKGVGFTEAPRGALGHWIKIKDGKIDNYQAVVPTTWNGSPRD
PKGGIGAFEASLLETPMADPNQPLEILRTLHSFDPCLACSTHVLSEDGQEMSRVTVR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacatcaccacgccgaatggcttcaaactcgacaatgccggccgccgcgtcgtc
gtcgatccggtgacccggatcgagggacatttgcgcgtcgaggtcaatgtcgacgccaac
aacgtgatccgcaacgcggtgtcgaccggcacgatgtggcgcggcatcgaagtgattttg
cgcggccgcgatccgcgcgacgcctgggccttcaccgaacggatctgcggcgtctgcacc
ggcacccacgccttgacctcggtgcgcgcggtggaaaacgcgctcgacatcaagatcccg
gaaaacgccaacaccatccgcaacatcatgcagctgacgctgcaggtgcacgaccacatc
gtgcatttctatcatctgcacgcgctggactgggtcgacatcgtctcggcactgtccgcc
gatccgaaggcgacctcgacgctggcgcagagcatttcgaactggccgctgtcgagtccg
ggctacttcaaggatctgcagacccggctgaagaagttcgtcgagtcggggcagctcggg
ccgttcaagaacggctattggggccatccggcctacaagttgccgccggaagccaatctg
atggcggtggcgcattatctggaggcgctcgacttccagaaggacatggtgaagatccac
accgtctatggcggcaagaacccgcatccgaactggctggtcggcggcgtgccctgcgcg
atcaatgtcgacggcgtgggcgcggtcggtgccgtcaacatggagcggctcaacctggtg
tcgtcgatcatcgaccagatggtgaccttcaccgagcaggtctatctgccggacttgcag
gcgatcgcctcgttctacaaggattggaccttcggcggcgggctgtcgtcgacatcggtg
atgagctacggcgacattccggaatacgccaacgactattcggcggcgtcgctgaaaatg
ccgcgcggcgtgatcctcaacggcaatctcaacgaggtgctaccggtcgatctcgccgac
ccctcgcaggtgcaggagttcgtcacccactcttggtacaaatatcccgacgagaccaag
ggcctgcatccgtgggacggtgtcaccgttccgcattatgagctggggccgaagtcgaag
ggcaccaagacccggatcgaggcggtcgacgaggaggcgaagtattcctggatcaagtcg
ccgcgctggaaaggcaacgcggtcgaggtcgggccgttggcgcgctacatcgtcggctac
gcgcagaacaagccggagttcaaggagccgaccgaaaagctcctcaaggacctcggcctg
ccggtgaccgcgctgttctccacgctcggccgcaccgcggcgcgcgcgctggaggcgcaa
tgggcggcgcatcagctgcgctacttccagaacaagctgatggcgtcgctgaaggccggc
gacagcgccaccgccaatgtcgagaagtggagcccggagacctggccgaaggaggtcaag
ggcgtcggcttcaccgaggcgccgcgcggcgcgctcggccactggatcaagatcaaggat
ggcaagatcgacaactaccaggcggtggtgccgaccacctggaacggcagtccgcgcgat
cccaagggcggcatcggcgccttcgaggcgagcttgctcgaaaccccgatggccgatccg
aaccagcctttggagatcctgcgcacgctgcattcgttcgacccgtgtctggcctgctca
actcatgtcttgagcgaggacggccaggaaatgagccgggtgacggtgcgctga
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