Rhodopseudomonas palustris BisB18: RPC_3772
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Entry
RPC_3772 CDS
T00336
Name
(GenBank) hydrogenase (NiFe) small subunit (hydA)
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00633
Nitrotoluene degradation
rpc01120
Microbial metabolism in diverse environments
rpc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
RPC_3772
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPC_3772
Enzymes [BR:
rpc01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
RPC_3772
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GFIT
Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
Zn_ribbon_IFT122
SseC
Motif
Other DBs
NCBI-ProteinID:
ABD89307
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Position
complement(4192927..4194051)
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AA seq
374 aa
AA seq
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MGAGTETFYEVIRRQGITRRSFVKFCSLTATSLGLGPIGATEIAQALETKPRVPVIWMHG
LECTCCSESFIRSAHPLVKDAVLSMISLDYDDTIMAAAGHQAEAILQETREKYKGQYILA
VEGNPPLNEDGMFCIDGGRPFVEKLKEMAEDSMAVIAWGACASWGCVQAAKPNPTQATPI
DKVIRNKPIIKVPGCPPIAEVMTGVVTYITTFGRLPELDRQGRPKMFYSQRIHDKCYRRP
HFDAGQFVEEWDDDAARKGYCLYKMGCKGPTTYSACSTVRWNGGVSFPIQSGHGCIGCTE
DNFWDNGSFYDRLTTIKQFGVEANADKIGATVAGVVGTAIAAHAAVTTVRSMAKRRKENG
GNGNGNKPNDTSAG
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcagggacagaaacattctatgaggtgatccgccgccaaggcatcacccggcgc
agcttcgtcaaattctgcagcctgaccgcgaccagcctcgggctcggcccgatcggcgcc
accgagatcgcgcaggcgctggagaccaagccgcgggtgccggtgatctggatgcacggg
ctggaatgcacctgctgctcggaaagcttcatccgctcggcgcatcctttggtcaaagac
gccgtgctgtcgatgatctcgctggattacgacgacaccatcatggcggcggccggccat
caggccgaagcgatcctgcaggagacccgcgagaaatacaaaggccagtacatcctcgcg
gtggaaggcaatccgccgctcaacgaagacggcatgttctgcatcgacggcggccgcccg
ttcgtcgagaagctgaaggagatggccgaagattccatggcggtgatcgcctggggcgcc
tgcgcctcctggggctgcgtgcaggcggcgaagcccaatccgacccaggccaccccgatc
gacaaggtgatccgcaacaagccgatcatcaaggtgccgggctgtccgccgatcgccgag
gtgatgaccggcgtcgtcacctacatcaccactttcggccggctgcccgagctcgaccgc
cagggccggccgaaaatgttctactcgcagcgcatccacgacaaatgctatcgccggccg
catttcgacgccggccagttcgtcgaagagtgggacgacgacgccgcgcgaaaaggctac
tgcctgtacaagatgggctgcaagggcccgaccacctacagcgcctgttcgacggtgcgc
tggaacggcggcgtctcgttcccgatccaatccggccacggctgcatcggctgcaccgaa
gataatttctgggacaacggctcgttctacgaccggctgaccaccatcaagcagttcggc
gtcgaggccaacgccgacaagatcggcgccaccgtagccggcgtggtcggcaccgcgatc
gccgcgcacgccgcggtcaccacggtgcgcagcatggcgaaacgtcgcaaggagaacggc
ggcaacggcaacggcaataaacccaacgacacatcggccggctga
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