Rhodopseudomonas palustris BisB18: RPC_3919
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Entry
RPC_3919 CDS
T00336
Name
(GenBank) probably methylase/helicase
KO
K26273
protein strawberry notch
Organism
rpc
Rhodopseudomonas palustris BisB18
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpc03036
]
RPC_3919
Chromosome and associated proteins [BR:
rpc03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
RPC_3919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
HisG
Motif
Other DBs
NCBI-ProteinID:
ABD89445
UniProt:
Q20ZJ1
LinkDB
All DBs
Position
complement(4347217..4351596)
Genome browser
AA seq
1459 aa
AA seq
DB search
MTPSSSSTVLAATVRSSTSLDSGDAAVRIIAAARLILPQLKRGHRIDAAGLRVAMETAYS
GSDADGAWDWKSAYDACEAATVLFLRKFGPAMRMRAASPDAMLPMLVKIAGLLPTHTRRS
EESEALQQFSTPIALGLAASAAAAITTSDIVLEPSAGTGLLAILAELSGAALVLNELAET
RAGLLALLFPELAVTRFDAAQIDDHLHAGITPSVVLMNSPFSAVANVDRRMSDAALRHIS
SALVRLAAGGRLVAITGANCGPDNPTWRDAFISLQQHGQVVFSAPIDGAVYARHGTTMDT
RLTVIDKRAAEDPRAFPESPGVAPDVATLLGWIAQSVPPRPPLALTPTTSSIVRSVPSID
RARKPVVARPFSLPAKPHEPEGIELAYQTVDWKPVEGGGITDALYEAYSLQSIRIAGAQA
HPTRLVQSAAMASVAPPKPSYRPHLPADVIERGVLSDAQLETVVYAGEANSQFLAGSWSV
DETFDIVAAARDDAETAVRFRLGFMLGDGTGAGKGRQVAGILLDNWLKGRRKAVWISKSD
KLIEDAQRDWSALGQERLLVTPLSRFRQGTPIRLAQGILFTTYATLRSDARDDKISRVKQ
IVEWLGADAGSEAGAGFDGVIIFDESHAMQNAAGGKGERGDQAASQQGRAGLRLQHAVPN
ARIVYVSATGATTVHNLAYAQRLGLWGGDDFPFATRAEFVEAIEAGGVAAMEVLARDLKA
LGLYAARSLSYEGVEYQLVEHRLTEEQIRIYDAYASGFSIIHNNLDAALRAANVTGTTGT
LNAQAKSAARSAFESAKQRFFNHLITAMKVPSLIASVERDLSDGHAAVIQIVSTGEALME
RRLAEIPTEEWGDVQVDITPREYVLDYLAHSFPTQLYEPFTDSEGNLSSRPVFRDGQPVQ
CRDAVARRDRLIEHLASLPGVHGALDQIVQRFGTDTVAEVTGRSRRIIRKTNADGTGRLA
VENRAGSANLGEAQAFMDDLKRILVFSEAGGTGRSYHAELSASNRRLRVHYLLEAGWKAD
AAIQGLGRTNRTNQAQPPLFRPIATNVKAEKRFLSTIARRLDTLGAITKGQRQTGGQGLF
RAEDNLESHYARDALRQLYLLLVNGKIADCSLQAFEDATGLKLTDSNGIKDDLPPITTFL
NRLLALTIDLQNILFAAFEQLLTARVEGAIASGSYDVGLETLTAESFAVTGRQTIYPHPG
TSTETSLLTITQRERNRPVTLDEALERLSDPRARLLVNSQSGRAAVQVPARSIMLDDGEV
ERLVRLIRPIEHPTLPLALMPQTHWQEADREFFARAWEAEVADVPEFTCSEIHIVAGLLL
PIWKRLPNESTRVYRLQTDTGQRIIGRKVSPAWAATATDVGLSTITPDAAFAALLDGKTI
IDLAESLQLRRVRVMGANRIELNGFSEAMRDRLRAYGLFSEIISWKLRFFVPVDATGPAV
LAKVLEHYPVLRVADRTAA
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatcttcttcctccacggtcctggccgcgaccgtacgatcttccacgtcgcta
gacagtggcgatgccgccgtccgaatcattgccgctgcacgcttgatccttccgcaactc
aagcgtggccaccgcattgacgccgcgggcctgcgcgtcgcgatggagacggcctattcc
ggttctgacgccgacggcgcttgggactggaagtctgcctacgacgcttgcgaagcggcg
accgtcctgttcctgcgcaaattcggtccggcgatgcggatgcgcgccgcatcacccgat
gccatgctgccgatgctggtgaaaattgcgggcctccttcccacccacacgcgacggtcc
gaagagagcgaggcgcttcagcaattcagtacaccgatcgctctcggacttgcggcttcc
gccgcggcggcaatcaccacctcggacatcgtcctggagccatcggccggaactgggctg
ctcgctattcttgccgaattgtccggcgctgccctcgttttgaacgagttggccgagacc
cgtgccggcttgctcgcgctgcttttcccagaactcgccgtgacccgcttcgacgccgcg
cagatcgacgatcacctccatgccgggatcacgccgagcgttgtgctaatgaactcgcca
ttttccgccgtggccaatgtggatcgccgcatgagcgatgcagcgttgcgtcatatctcg
tctgcactggtgcggctggcggctggcggccgcctggttgccatcaccggtgccaattgc
gggcccgacaatccgacatggcgtgacgcctttatcagcctgcagcagcatgggcaggtg
gtgttttccgcgccgatcgacggcgcggtctatgcccggcatggcacaaccatggacacc
cggttgaccgtgatcgacaaacgggccgccgaggatccccgcgcatttccggagtctccg
ggcgtagcgccagatgtagccacgctgctcggctggatcgcgcaatccgtgccgccacgg
ccgccccttgcgctgacgccgacaacttcctcgatcgtccgatcggtgccgagtattgat
cgcgcgcggaagccggtcgtcgccaggcccttctctctccccgccaaacctcacgaaccg
gaggggatcgaactcgcctatcaaaccgtcgactggaagccggtcgagggcggcggtatc
accgatgcgctgtatgaagcctacagcttgcagtcgatccgaattgccggcgcgcaggct
catccgaccaggctggtgcaatcggcggcgatggcctcggtggcgccgccgaagccgagc
tatcgtccgcatcttcctgctgatgtcatcgaacgcggcgtcttgtcggatgcccagctg
gagacggtggtctatgccggcgaagccaattcacagttcctcgcaggatcctggagcgtt
gacgagactttcgacattgtcgcggccgcgcgcgacgacgccgagaccgcggtgcggttt
cgcctgggcttcatgcttggcgacggcaccggcgccggcaagggccggcaggtcgcgggt
atcctgctcgacaattggctgaaagggcgccgcaaggcggtctggatcagcaagtccgac
aagctgatcgaggatgcccagcgtgattggtcggcgctcggacaggaacggctgctggtg
acaccgctgtcgcgctttcgccagggcaccccgatccgtctcgcgcaaggcatccttttt
acgacctacgccacgctgcgctccgacgctcgtgacgacaagatatcgcgggtgaaacag
atcgtggaatggttgggcgccgacgcaggctctgaggccggggcgggtttcgacggcgtg
atcatttttgacgagtctcacgcgatgcagaatgctgcgggcggcaaaggcgaacgcggc
gatcaggccgcctcgcagcagggccgcgccggtctccgattgcaacatgcggtgcccaat
gcgcgcatcgtttacgtctcggcgaccggtgccaccacggttcataacctcgcctatgcg
cagcgcctcgggctctggggcggcgacgactttcctttcgccacccgcgcggaattcgtc
gaggcgatcgaggccggcggtgtcgcggcgatggaagtgctggcccgcgatctgaaggcg
ctcgggctctatgcggcgcggtcgctgtcctatgagggagtggaataccaactggtcgag
caccggctcaccgaggagcagatccgcatctatgacgcctatgcgagcggcttcagcatc
atccacaacaacctcgatgccgcgctacgggcggccaacgtcaccggcaccaccggcacg
ctgaacgcgcaggccaagtccgccgcgagatccgcattcgaatccgccaagcagcggttc
tttaatcacttgatcaccgcgatgaaggtgccgtcgctgatcgcgtcggtcgaacgggat
ctgagcgacggccacgccgccgtgattcagatcgtctcgaccggtgaggcgctgatggag
cgccggcttgcggaaattcccaccgaggaatggggcgatgttcaggtcgacatcacgccg
cgagaatatgtgctcgattatctggctcattcattcccgacccaactctacgagccgttc
accgacagcgaaggcaatctgtcgtctcggccggtgtttcgggatggccaaccggtgcaa
tgccgggacgcggtcgcgcggcgagaccgattgatcgaacatctggcctcgctgccgggt
gtgcatggtgcactcgatcagatcgtgcagcgctttggcaccgacacggttgcggaggtg
acaggacgttcccggcgcatcatccgcaagaccaacgccgatggtacaggtcgccttgcc
gtggagaaccgcgccggctccgccaatctcggcgaggcgcaggcgttcatggatgatctc
aaacgcatcctggtgttctcggaagctggcggtaccgggcgctcctatcatgcggagctg
tcggccagtaaccggcgcctgcgggtgcattatctgttggaagccggatggaaggccgat
gcggcgatccaggggctcggccgcaccaatcgtaccaatcaggcgcagccgccgctgttc
cggccgatcgccaccaatgtgaaagcggagaagcgctttctctcgaccattgcgcggcgg
ctcgacacgctgggcgccatcaccaagggccagcgccagaccggcgggcagggcctgttc
cgcgccgaggacaatcttgaaagccattatgcccgcgacgccctgcggcaactgtatctg
ctgctggtcaatggcaagattgcggattgttcgctgcaagcgttcgaggacgccaccggg
ctgaagctgactgatagcaacgggatcaaggacgatctgccgccgatcaccaccttcctg
aatcggctgttggcgctgacaatcgatctgcagaacattctgtttgccgcgttcgagcaa
ttgctgaccgcgcgcgtcgagggcgcgatcgcctccggcagctatgacgtcggcctggaa
actctgaccgccgagagttttgccgtcaccggccggcagacgatctacccccatcccggc
acctcgactgagaccagtctgctgacgatcacccagcgcgagcgtaaccggccggtcacg
ctcgacgaggcattggagcgcctctccgatccgcgcgcgcgtcttctggtcaacagccaa
tcggggcgtgccgcggtgcaggttccggcacgtagcatcatgctggacgacggcgaggtg
gaacgcctggtccggctgatccggccgatcgagcatccgacgttgccgctggctttgatg
ccgcagacccattggcaggaagccgatcgggaattctttgcgcgcgcctgggaagcagaa
gtggctgatgtgccggaatttacctgcagcgagatccacatcgttgccgggctgctgttg
ccgatctggaagcggttgccgaacgagtcgacgcgtgtctaccggctccagaccgacacc
ggccaacgcatcatcggccgcaaggtgtcacccgcctgggcggcgaccgcgaccgatgtg
ggtctatcgaccatcacccccgatgctgcgtttgcggcactgctcgatggcaagacgatc
attgatctcgctgaatctttgcagcttcggcgtgtccgcgtgatgggtgcaaaccggatc
gagctgaacggcttctccgaggcgatgcgcgaccggctgcgcgcctacggcctgttcagc
gagatcatttcctggaagctgcgcttcttcgtgccggtcgacgcgaccggcccggcggtg
ctggccaaagtgctggagcactatccggtgctccgggtcgccgatcggacggcggcgtga
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