Rhodopseudomonas palustris BisB18: RPC_4074
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Entry
RPC_4074 CDS
T00336
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00061
Fatty acid biosynthesis
rpc00071
Fatty acid degradation
rpc01100
Metabolic pathways
rpc01212
Fatty acid metabolism
rpc02024
Quorum sensing
Module
rpc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPC_4074
00071 Fatty acid degradation
RPC_4074
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPC_4074
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpc01004
]
RPC_4074
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_4074
Enzymes [BR:
rpc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPC_4074
Lipid biosynthesis proteins [BR:
rpc01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RPC_4074
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPC_4074
Exosomal proteins of breast cancer cells
RPC_4074
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ABD89600
UniProt:
Q20Z36
LinkDB
All DBs
Position
4527254..4528939
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AA seq
561 aa
AA seq
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MERIWLKHYPPGVPADIDVNQYPSLVDLLEESFAKFRDRKAFICMDKAISYGQLDEMSTA
LGAYLQSKGLKQGARVAVMMPNVLQYPIATAAVLRAGFAVVNVNPLYTPRELEHQLKDSG
AEAIIVLENFASTVEHVIARTGVKHVIVGAMGDLLGFKGVIVNFVVRRVKKMVPAFSLPS
KVAFNDALAAGRSLKFAKPTIGPDDVAFLQYTGGTTGVSKGATLLHRNVVANVLQNDAWL
QPALTKPPHVDQLFIVCALPLYHIFALTVCFLLAMRAGGVNLLIPNPRDMKSFIKELKKY
QVNSFPAVNTLYNGLLHAEGFDQVDFSKLKISNGGGMAVQRPVAEQWSKLTGCGIAEGYG
LSETAPVLTCNPATIDSFTGSIGLPLPSTYLSIRDDAGNELSLGQIGEICAKGPQVMAGY
WNMPEETALVMTEDGYFRTGDIGVMSEDGSTKIVDRKKDMILVSGFNVYPNEVEEVIATH
PGVLECAVVGVHDSRSNESVKAFVVRKDPEVTAEEIIKFCHTQLTNYKVPKQIEFRTELP
KTNVGKILRRQLRDEKKQAAA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcatctggctcaagcattatccgcccggcgtgcccgcggacatcgacgtcaac
caatacccgtcgctggtcgacctgctggaagagagcttcgcgaaatttcgcgaccgcaaa
gccttcatctgtatggacaaggcgatcagttacggccagctcgacgagatgtcgacggcg
ctcggcgcttatctgcaaagcaaggggttgaagcagggcgcgcgcgtcgcggtgatgatg
ccgaacgtgctgcaatatccgatcgccaccgccgcggtgctgcgcgccggctttgccgtg
gtcaacgtcaatccgctctacaccccgcgcgagctcgaacatcagctgaaggattccggc
gccgaggcgatcatcgtgttggagaacttcgcctccaccgtcgagcatgtgatcgcgcgc
accggcgtgaagcacgtcatcgttggcgccatgggcgacctgctcggcttcaaaggcgtc
atcgtcaacttcgtggtgcgccgggtcaagaaaatggtgccggcgttctcgctgccgagc
aaggtggcgttcaacgacgcgctggccgcagggcgcagcctcaaatttgccaagccgaca
atcggcccggacgacgtcgccttcctgcaatataccggcggcactaccggcgtgtcgaag
ggcgccacgctgctgcatcgcaacgtggtcgccaacgtgctgcagaacgacgcctggctg
cagccggcgctcaccaaaccgccgcatgtcgatcagttgttcatcgtctgcgcgctgccg
ctgtatcatatcttcgcgctcaccgtctgcttcctgctggcgatgcgcgccggcggcgtc
aacctattgatccccaatccgcgcgacatgaagagcttcatcaaggaattgaagaagtat
caggtcaacagcttccccgcggtcaacacgctgtacaacggcctgctgcacgccgagggg
ttcgaccaggtggacttctccaagctgaaaatttccaacggcggcggcatggcggtgcaa
cgcccggtcgccgagcagtggagcaagctcaccggctgcggcatcgccgaaggctacggg
ctgtcggaaaccgcgccggtcctgacctgcaacccggcgactatcgacagcttcaccgga
tcgatcggcctgccgctgccctcgacctatctgtcgatccgcgacgacgccggcaacgaa
ttgtcgctcggccagatcggcgagatctgcgccaagggtccgcaagtgatggccggttat
tggaacatgccggaggaaaccgcgctggtgatgaccgaggacggttacttccgcaccggc
gacatcggggtgatgagtgaagacggctccaccaagatcgtcgaccgcaagaaggacatg
atcctggtgtcgggcttcaacgtctatccgaacgaggtcgaggaagtcatcgccacccat
cccggcgtgctggaatgcgccgtggtcggcgtccatgattcgcgcagcaacgaatcggtg
aaagccttcgtggtgaggaaagatcccgaggtgaccgccgaagagatcatcaagttctgc
catacccagctgaccaactacaaagtgccgaaacagatcgaattccgcaccgaactgccg
aagaccaatgtcggcaagatcctgcgccggcaattgcgcgacgagaagaaacaggccgcg
gcgtaa
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