Rhodopseudomonas palustris BisB18: RPC_4531
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Entry
RPC_4531 CDS
T00336
Name
(GenBank) Allophanate hydrolase subunit 2
KO
K01941
urea carboxylase [EC:
6.3.4.6
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00220
Arginine biosynthesis
rpc00791
Atrazine degradation
rpc01100
Metabolic pathways
rpc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09105 Amino acid metabolism
00220 Arginine biosynthesis
RPC_4531
09111 Xenobiotics biodegradation and metabolism
00791 Atrazine degradation
RPC_4531
Enzymes [BR:
rpc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.6 urea carboxylase
RPC_4531
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Gene cluster
GFIT
Motif
Pfam:
CT_A_B
CPSase_L_D2
Biotin_carb_N
CT_C_D
Biotin_carb_C
Biotin_lipoyl
Biotin_lipoyl_2
Dala_Dala_lig_C
HlyD_3
ATP-grasp
GCV_H
RimK
Motif
Other DBs
NCBI-ProteinID:
ABD90053
UniProt:
Q20XT3
LinkDB
All DBs
Position
complement(5059801..5063352)
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AA seq
1183 aa
AA seq
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MFDKVLIANRGEIASRIGKTLRRIGIASVAVYSDADRFTRAVLDADQAVRVGASPAAESY
LNIDAIIKACRETGAQAVHPGYGFLSENRGFAERLASHGIVFIGPRPEHLDAFGLKHKAR
ELAQHSNVPLLPGSGLLETIDEAMREAERIGFPLMLKSTAGGGGIGMQLCHDADTLRERF
ATVQRTAKASFGDARVYLERFVAEARHIEVQIFGDGQGKVIALGERDCSLQRRNQKVIEE
TPAPGLSDELRTRLHRAAVALGESVAYQSAGTVEFIYDVAREDFYFLEVNTRLQVEHPVT
EAVFGVDLVEWMVRQAAGDSPLANYTPRPPQGAAIEVRLYAENPNAGFRPSAGRLTDVEF
PDGVRVDGWIETGVEVTPFYDPMLAKLIVHADSRDQAIDKLRDALQQSRVAGIETNLDYL
RAIAGSELFRSGRVATNVLASFAFAPRTIDVLAPGAQSGLQELPGRLHLWHVGVPPSGPM
DERSFRLANIIVGNPEVTAALELTVNGPTLRFNTDAVIGLAGAHMLAKLDGVAIAHHAPV
AVKAGQTLQIGKIDGAGQRCYLAVRGGFDAPQILGSRAVFMLGAFGGHSTGALKPGDVLH
IVAESDALAAPRAATPDEIPPFTRAWQIGVIYGPHGAPDFFRDDDIATLFSTDYEVHFNS
ARTGVRLIGPKPQWARADGGEAGLHPSNIHDNAYAVGSLDFTGDMPIILGPDGPSLGGFV
CPAVVARDELWKIGQLKPGDKVRFVPLPRDDDPVAGPTVLAGPRELGSAIVAGRDDGAMP
VVYRRAGDDNLLVEYGPMELDIALRLRVQLLADAVAAAKLPGLIDLTPGIRSLQIHYDGA
TLSRRKLLDALAAIEGELPAVDAMRVPSRVVHLPLSWNDPQAVKAMHKYQELVRPDAPWC
PSNIDFIRRINGLDDEAAVQRIVFDASYLVLGLGDVYLGAPVATPVDPRHRLVTTKYNPA
RTWTPENAVGIGGAYMCIYGMEGPGGYQLFGRTIQMWNSWRSTPEFTPGHPWLLRFFDQI
RFFPVSASELLEAREAFPHGQYPLRIEETVFSYADYAKGLARDQDSIAAFKQRQQAAFEA
ERQRWKQLRLDAVQDDESAGAEAAPDDIPDGATGVFSEVPGNVWKILVDEGAMVAAGDTL
AIIESMKMEISVPAPVAGRLASIRIKPGQTLRAGDVVAVIAEG
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacaaggtcttgattgccaaccgcggcgaaatcgcctcgcggatcggcaaaacg
ttgcgccgcatcggcatcgcttcggtggcggtgtattccgacgccgaccgcttcacccgc
gcggtgctcgacgccgaccaggcggtgcgggtcggcgcttcgcctgcggcggagagctat
ctcaacatcgatgcgatcatcaaagcgtgtcgagagaccggcgcgcaggcggtgcatcct
ggctacggctttctctccgagaaccgcggctttgccgagcgcctggcctcgcacggcatc
gtcttcatcgggccgcggccggagcatctcgatgcctttggcttgaaacacaaggcgcgc
gaattggcgcagcacagcaacgtgccgctgctgccgggctccggcctgttggagacgatc
gatgaggcgatgcgcgaggccgagcgcatcggctttcccctgatgctgaagagcaccgcg
ggcggcggcggcatcggcatgcagctgtgccacgacgccgacacgctgcgcgagcgcttc
gccaccgtgcagcgcaccgcaaaggcgagcttcggcgacgcccgagtctatctggagcgt
ttcgtcgccgaggcgcgccacatcgaggtgcagatattcggcgacggtcagggcaaagtg
atcgcgctcggcgagcgcgactgctcgctgcagcggcgcaaccagaaagtgatcgaggag
accccggcgccgggcctcagtgacgaactccgtacgcggctgcatcgcgctgcggtggcg
ttgggcgagagcgtcgcctatcagtccgccggcaccgtcgaattcatctacgacgtcgcg
cgcgaggacttctattttctcgaggtgaacacaaggctgcaggtcgagcatccggtgacc
gaagcggtgttcggcgtcgatctggtggaatggatggtgcggcaggcggctggcgacagc
ccgcttgcgaactacacgccgcgcccgccgcagggcgccgcgatcgaggtgcggctctac
gcggaaaatcccaacgccggctttcgccccagcgccggccggctgacggatgtggaattt
ccggacggcgtgcgggtcgatggttggatcgagaccggcgtcgaggtgacgccgttctac
gatccgatgctggccaagctgatcgtgcatgccgacagccgcgatcaggcgattgataaa
ctacgcgacgcgctgcagcaatcccgcgtcgccggcatcgagaccaatctggactatctg
cgcgccatcgccggctccgagctgtttcgctctggccgcgtcgccaccaatgtacttgcg
agtttcgcgttcgcaccccgcaccatcgacgtgctggcgcccggcgcgcagtccggcttg
caggaattgccggggcggctgcatctgtggcacgtcggcgtgccgccgtcggggccgatg
gacgagcgctcgttccggcttgctaatatcattgtcggcaatcccgaggtcaccgccgcg
ctcgaactcaccgtcaacgggccgacgctgcgtttcaacaccgacgcggtgatcgggctg
gcgggcgcccacatgctggcgaagctcgacggcgtcgcgatcgcgcatcacgcgccggta
gctgtgaaagcggggcagacgctgcaaatcggcaagatcgacggcgccgggcagcgctgt
tacctcgcggttcgcggcggcttcgacgcgccgcagattcttggctcacgcgcggtgttc
atgctgggcgcgttcggcggccattcgaccggtgcgctgaaacccggcgacgtgctgcat
atcgttgcggagagcgacgctctcgccgcaccccgcgcggctacgcctgacgagatcccg
ccgttcacccgcgcctggcagatcggcgtgatctacggcccgcacggcgcgccggatttc
ttccgcgacgacgatatcgcgacgttgttttccaccgactacgaggtgcatttcaattcc
gcgcgcaccggcgtccggctgatcgggccgaagccgcaatgggcgcgcgccgacggcggc
gaggcgggcctgcatccctcgaatattcacgacaacgcctatgcggtcggctcgctggat
ttcaccggcgacatgccgatcattctcggtcccgatggcccgagcctcggcggcttcgtc
tgccctgcggtggtggcgcgtgacgaattgtggaagatcggccagctcaagcctggcgac
aaggttcgcttcgtgccgctgccgcgcgatgacgacccggtcgccggcccgacggtgctc
gccgggccgcgcgagcttggctcggcgatcgtggcggggcgcgacgacggcgccatgcca
gtggtctatcgccgcgccggcgacgacaatctattggtcgaatacggcccgatggaattg
gacatcgcgctgcggttgcgggtgcagctgttggccgacgcggtggccgcggcgaaattg
cccgggctgatcgatctcaccccaggtatccgctcgttgcagatccattacgacggcgcc
acgctatcgcgccgcaaactgctcgacgcgctggccgccatcgaaggcgaactgccggcg
gtcgatgccatgcgcgtgccgagccgcgtcgtgcatctgccgctgtcgtggaacgacccg
caggcggtcaaggcgatgcacaaatatcaggaactggtgcggcctgatgcgccgtggtgc
ccgtcgaacatcgatttcatccggcgcatcaacgggctcgacgatgaggccgcggtgcag
cgcatcgtgttcgacgccagctatttggtgcttggcctcggcgacgtctatctcggcgcg
ccggtggcgaccccggtcgatccgcggcatcggctggtgaccacgaagtacaatccagcg
cggacctggacgccggaaaacgccgtcggcatcggcggcgcctatatgtgcatctacggc
atggaagggccgggcggttatcaactgttcggccgcaccatccagatgtggaattcctgg
cgctcgacgccggaattcacccccggccatccgtggctgttgcggttcttcgaccagatc
agattcttcccggtcagcgcctccgaattgctggaggcccgcgaggcgtttccgcacggc
caatatcccctgcgcatcgaggaaacggtgttttcctatgcggactacgccaaggggctg
gcgcgggatcaggatagcatcgcggcgttcaagcagcgccagcaggcggcgttcgaggcc
gagcggcagcgctggaaacaattgcggctcgacgcggttcaggatgatgagtcggccggt
gcagaagccgcgcccgacgacatccccgacggtgcgaccggggtgttttccgaagtgccg
ggcaacgtctggaagattctggtcgacgaaggcgccatggtcgcggccggcgacacgctg
gcgatcatcgaatcgatgaagatggagatcagcgtgccggcgccggtcgccggacgcttg
gcgtcgatccgcatcaagccggggcagacgctgcgcgccggagacgtggtggcggtgatt
gcggaggggtga
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