Rhodopseudomonas palustris BisB18: RPC_4726
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Entry
RPC_4726 CDS
T00336
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RPC_4726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpc03019
]
RPC_4726
03110 Chaperones and folding catalysts [BR:
rpc03110
]
RPC_4726
03029 Mitochondrial biogenesis [BR:
rpc03029
]
RPC_4726
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_4726
Enzymes [BR:
rpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RPC_4726
Messenger RNA biogenesis [BR:
rpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RPC_4726
Chaperones and folding catalysts [BR:
rpc03110
]
Heat shock proteins
HSP60 / Chaperonin
RPC_4726
Mitochondrial biogenesis [BR:
rpc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RPC_4726
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RPC_4726
Exosomal proteins of other body fluids (saliva and urine)
RPC_4726
Exosomal proteins of breast cancer cells
RPC_4726
Exosomal proteins of colorectal cancer cells
RPC_4726
Exosomal proteins of bladder cancer cells
RPC_4726
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TetR_C_13
Motif
Other DBs
NCBI-ProteinID:
ABD90248
UniProt:
Q20X88
LinkDB
All DBs
Position
5286835..5288490
Genome browser
AA seq
551 aa
AA seq
DB search
MAAKDVKFAGDARDRMLRGVDILANAVKVTLGPKGRNVLIERSFGAARITKDGVTVAKEI
ELEDKFENMGAQMLREVASKTNDLAGDGTTTATVLAQAIVREGAKSVAAGMNPMDLKRGI
EIAVAAVIKDLVKRAKPVASSAEIAQVGTISSNGDAAIGKMIAQAMQKVGNEGVITVEEN
KSLTTEVDIVEGMKFDRGYLSPYFVTNAEKMAVEFDDAYVLLHEKKVSGLQSMLPLLEAV
VQSGKPLVIIAEDVEGEALATLVVNRLRGGLKVAAVKAPGFGDRRKAMLEDLAILTGGQL
ISDDLGMKLENVTLKMLGRAKKLVIDKENTTIVGGAGKKADIETRVGQIKAQIEETTSDY
DREKLQERLAKLAGGVAVIRVGGATEVEVKEKKDRVEDALNATRAAVQEGIVPGGGVALL
RAKKAVGRISNDNPDVQAGINIVLKALEAPIRQIAENAGVEGSIVVGKILENKSETFGFD
AQTEEYVDMLAKGIVDPAKVVRTALQDASSVAALLVTTECMVAEMPRDAAPAMPGGGGGM
GGMGGMGGMGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaggacgttaaatttgccggcgacgcgcgcgatcgcatgttgcgcggcgtc
gacattctcgccaacgcggtcaaggtgacgctcggtccgaagggccgcaacgtcttgatc
gagcgctcgttcggcgccgcccgcatcaccaaggacggcgtcaccgtcgccaaggagatc
gagctcgaggacaagttcgagaacatgggcgcgcagatgctgcgcgaggtcgcctccaag
accaacgacctcgccggtgacggcaccaccaccgccaccgtgctggcgcaggcgatcgtg
cgcgaaggcgccaagtcggtcgccgccggcatgaacccgatggacctcaagcgcggcatc
gagatcgccgtcgccgcggtgatcaaggacctcgtcaagcgcgccaagccggtggcctcc
tccgccgagatcgcccaggtcggcaccatctcgtcgaacggcgacgccgcgatcggcaag
atgatcgcccaggcgatgcagaaggtcggcaacgaaggcgtcatcaccgtcgaagagaac
aagtcgctgaccaccgaagtcgacatcgtcgaaggcatgaagttcgatcgcggctacctc
agcccgtacttcgtcaccaacgccgaaaagatggccgtcgagttcgacgacgcctatgtg
ctgctgcatgagaagaaggtgtcgggcctgcagtcgatgctgccgctgctcgaagccgtg
gtgcagtccggcaagccgctggtgatcatcgccgaggacgtcgaaggcgaggcgctggcc
accctggtggtcaaccggctgcgtggcggcctcaaggtcgccgccgtcaaggcgccgggc
ttcggcgatcgccgcaaggcgatgctggaagacctcgcgatcctgaccggcggtcagctg
atctccgacgacctcggcatgaagctcgagaacgtcacgctgaagatgctgggtcgcgcc
aagaagctggtgatcgacaaggagaacaccaccatcgtcggcggcgccggcaagaaggcc
gatatcgaaacccgggtcggccagatcaaggcgcagatcgaggaaaccacctcggactac
gaccgcgagaagctgcaggaacggctcgccaagctggccggcggcgtcgcggtgatccgc
gtcggcggcgccaccgaggtcgaggtgaaggaaaagaaggaccgcgtcgaagacgcgctc
aacgccacccgcgccgcggtgcaggaaggcatcgtccccggcggcggcgtcgccctgctg
cgcgccaagaaggcagtcggccgtatcagcaacgacaatcccgacgtccaggccggcatc
aacatcgtgctgaaggcgctggaagctccgatccgccagatcgccgagaacgccggcgtc
gaaggctcgatcgtggtcggcaagatcctcgagaacaagtcggagaccttcggcttcgac
gcccagaccgaggaatatgtcgacatgctcgccaagggcatcgtcgacccggccaaggtg
gtgcgtaccgcgctgcaggacgcctcctcggtcgcggccttgctggtgaccaccgaatgc
atggtcgcggaaatgccgcgcgacgcggccccggcgatgccgggcggcggcggcggcatg
ggcggaatgggtggcatgggcggcatgggcttctaa
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