Rhodopseudomonas palustris BisB18: RPC_4848
Help
Entry
RPC_4848 CDS
T00336
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc03030
DNA replication
rpc03430
Mismatch repair
rpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPC_4848
03430 Mismatch repair
RPC_4848
03440 Homologous recombination
RPC_4848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpc03032
]
RPC_4848
03400 DNA repair and recombination proteins [BR:
rpc03400
]
RPC_4848
Enzymes [BR:
rpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPC_4848
DNA replication proteins [BR:
rpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPC_4848
DNA repair and recombination proteins [BR:
rpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPC_4848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_30
AAA_5
AAA_16
RuvB_N
AAA_14
AAA_18
AAA_2
TsaE
RCF1-5-like_lid
AAA_assoc_2
SRP54
AAA_19
Rad17
nSTAND3
AAA_24
SKI
TraI_hel_assoc_N
CbiA
RNA_helicase
Glyco_tranf_2_5
AAA_28
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ABD90370
UniProt:
Q20WW6
LinkDB
All DBs
Position
complement(5408476..5410332)
Genome browser
AA seq
618 aa
AA seq
DB search
MTDAGPPVIPPSDPVSAAPSAGTPYRVLARKYRPNNFEDLIGQDAMVRTLSNAFETGRIP
QAWILTGVRGVGKTTTARILARALNYEMPDGSVTAPTIHMPVPGVHCQAIMESRHIDVLE
MDAASHTGIEDVRQITDGVRYSPTSARYKVYIIDEVHMLSDKAFNAFLKTLEEPPEHAKF
VFATTEIRKVPVTVLSRCQRFDLRRVEADVLMAHLANIAGKENVEVEPEALGIIARAAEG
SVRDSLSLFDQAIAHAAGTVRADAVRQMLGLADRTRVIDLFAHLAGGDIASAFGEFREQY
DVGADPVVVLSDLAEFVNFVTRVKIVPATAENVAFGETERLRAREFAAKLSMRVLSRMWQ
MLLKGITEVQGATRPAAAAEMVLVRIAYVADLPTPDEAIKMLQDGGPASASAASAAARNG
ASASSSSNSSSGSPASAMASARMSSAPRGGAEASLRPQLSASQPAAAAAPVLTINSFPEL
VALAAEKRDVMTRVALEADVRLVRIEDGRLELAMERSAARTLINDLSRKLEQWTGRRWTV
IVSNEEGQPTLRSQALAQQSERERAAEADPRVQEVLARFPGAKVLEVRRLAPETPDADAP
EADATGEDSPETLDNDDQ
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgctggccctcccgtcattcccccgagcgatcccgtcagcgccgcgccctcg
gccggcacgccgtatcgcgtgctggcgcgcaaatatcgcccgaacaatttcgaggatctg
atcggccaggacgccatggtgcgcacgctgtcgaatgcgttcgagaccgggcggattccg
caggcctggattctcaccggggtgcgcggcgtcggcaagaccaccaccgcgcgcatcctc
gcccgcgcgctgaattacgaaatgccggacggctcggtgaccgcgccgaccatccacatg
ccggtgcccggcgtgcattgccaggcgatcatggaaagccggcacatcgacgtgctggag
atggacgcggcctcgcataccggcatcgaggacgtccgccagatcaccgacggcgtgcgc
tattcgccgaccagcgcgcgctacaaggtctacatcatcgacgaagtccacatgctgtcg
gacaaggcgttcaacgccttcctgaagacgctggaggagccgccggagcacgccaaattc
gtgttcgccaccaccgaaatccgcaaggtgccggtgacggtgctgtcgcgctgccagcgc
ttcgacctgcgccgcgtcgaggccgacgtgttgatggcgcatcttgccaatatcgccggc
aaagagaacgtcgaggtcgagccggaggcgctcggcatcatcgcccgcgccgccgaaggc
tcggtgcgcgattcgctgtcgctgttcgatcaggcgatcgcccatgccgccggcacggtg
cgcgccgacgcggtgcggcagatgctggggctggccgatcgcacccgggtgatcgacctg
ttcgcgcatctggcgggcggcgacatcgccagcgcgttcggcgaattccgcgaacaatac
gacgtcggcgccgacccggtggtggtgttgagcgacctcgccgaattcgtcaatttcgtc
acccgcgtgaagatcgtgccggcgaccgcggagaacgtcgcgttcggcgagaccgagcgg
ctgcgcgcccgcgagtttgccgcgaagctgtcgatgcgggtgctgtcgcggatgtggcag
atgctgttgaagggcatcaccgaagtgcagggcgccacccgcccggcggcggccgccgaa
atggtgctggtgcggatcgcctatgtggcggatctgccgacccccgacgaagccatcaag
atgttgcaggacggcggaccagcatcggcgtcggcggcctccgccgcggcccgcaacggc
gcctcggcctcatcatcatcgaattcatcatcgggctcgccggcgagcgcgatggcgtcg
gcgcggatgtcgtcggcgccgcgcggcggcgccgaagcctcgctgcgtccgcagctcagc
gcgtcgcagccggctgctgcggcggcgccggtgctgaccatcaacagcttccccgaactg
gtggcgctcgccgccgagaagcgcgacgtgatgacccgcgtcgctttggaagccgacgtg
cggctggtgcggatcgaagacggccggcttgagctcgcgatggagcgtagcgccgcgcgc
acgctgatcaacgatctgtcgcgcaaattggagcaatggaccggccggcgctggaccgtg
atcgtctccaatgaagaggggcagccgacgctgcgctcgcaggcgctggcgcagcagagc
gaacgcgaacgcgccgcggaggccgatccgcgcgtgcaggaggtgctggcgcggtttccc
ggggccaaggtcctggaggtgcgccggctcgcgcccgaaacgccggacgccgatgcgccg
gaagccgatgccaccggcgaagattcgccggagactctcgacaacgacgaccagtaa
DBGET
integrated database retrieval system
