Rhodopseudomonas palustris BisB18: RPC_4871
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Entry
RPC_4871 CDS
T00336
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rpc
Rhodopseudomonas palustris BisB18
Pathway
rpc00350
Tyrosine metabolism
rpc00360
Phenylalanine metabolism
rpc00380
Tryptophan metabolism
rpc01100
Metabolic pathways
rpc01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpc00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
RPC_4871
00360 Phenylalanine metabolism
RPC_4871
00380 Tryptophan metabolism
RPC_4871
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpc04147
]
RPC_4871
Enzymes [BR:
rpc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
RPC_4871
4.1.1.105 L-tryptophan decarboxylase
RPC_4871
Exosome [BR:
rpc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RPC_4871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_5
PDXDC1-like_cen2
Motif
Other DBs
NCBI-ProteinID:
ABD90393
UniProt:
Q20WU3
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All DBs
Position
5437679..5439139
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AA seq
486 aa
AA seq
DB search
MSTTRREAADALGHSETLDPQDWEELRAQGHRMLDDMLDYIAKVRERPVWRPIPAAVRGQ
FQQALPRAPSDLSDVYGEFSELIAPYATGNVHPGFMGWVHGGGTPVGVLAEMLAAGLNAN
CGGRNHMPIEVERQIVRWVRQLFGFPETASGVFVTGTSMANLMAVLVARTATLGTEVRQR
GLGEAGLTAYTSVAAHGCIAQAMDLSGLGRDALRRIGQDAAHRIDVTALRARIAEDRAAG
RAPFLVIGTAGAVDTGAIDDLDALAELCRGEKLWFHIDGAFGALGMLSPQIAPRLKGLER
ADSIAFDFHKWGQVQYDAGFLMVRDGERHRETFAAPVAYLRRETRGLAAGSPWPCDYGPD
LSRGFRALKTWFTLKTYGTDKLGAMIERTCALAKYLERKIAAEPRLELLAPVALNIVCFR
FRGDDPNHLNAEIVADLHESGIVAPSTTTIHGALAIRAAIVNHRTDVQDVDALIEAVLRF
GEARVK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacgacgcggcgcgaggccgcggacgcgttgggccacagcgagacgctcgatccg
caagactgggaggaattgcgcgcccagggccaccgcatgctcgacgacatgctggactat
atcgccaaggtccgcgaacgcccggtgtggcggccgatccccgcggcggtgcgcgggcaa
ttccagcaggcgctgccgcgggcgccctccgacctgagcgacgtctatggtgagttcagc
gagctgattgcgccttacgccaccggcaatgtgcatccaggcttcatgggctgggtgcat
ggcggcggcaccccggtcggggttttggccgagatgctggcggcggggctcaacgccaat
tgcggcggccgcaaccacatgccgatcgaagtggagcgccagatcgtgcgctgggtccgg
cagctgttcggctttccggagaccgccagcggggtgttcgtcaccggcacctcgatggcc
aacctgatggcggtgctggtggcgcgcaccgcgacgctcggcaccgaggtgcggcaacgc
gggctcggcgaggccgggctcaccgcctacacctcggtcgcggcccacggctgcatcgcc
caggcgatggatctctcaggtctcggccgcgacgcgttgcgccggatcggccaagacgcc
gcccaccgcatcgacgtcacggcgttgcgggcgcggatcgccgaggaccgcgccgccggg
cgggcgccgttcctggtgatcggcaccgcgggcgcggtcgacaccggcgcgatcgacgac
ctcgatgcgctggctgagctctgccgcggcgagaagctgtggtttcacatcgacggcgcg
ttcggcgcactcggcatgttgtcgccgcagatcgcgccgcggctgaagggacttgagcgc
gcggattccatcgcgttcgatttccacaaatggggccaggtgcaatacgacgccggcttc
ctgatggtgcgcgacggcgagcggcatcgcgagaccttcgcggcgccggtggcctatctg
cgccgcgaaacccgtggcctcgccgccggctcgccctggccgtgcgactacggcccggat
ctgtcgcgcggcttccgtgcgctgaagacctggttcacgctgaagacctacggcaccgac
aagctcggcgcgatgatcgaacgcacctgcgcgctggcgaagtatctggagcgcaagatc
gccgccgagccgcggctggaactgctggcgccggtggcgctcaacatcgtctgcttccgg
ttccgcggcgacgatccgaaccacctcaacgccgagatcgtcgccgacctgcacgaatcc
ggcatcgtcgcgccctcgaccaccacgatccacggcgcgctggcgatcagggctgcgatc
gtcaaccaccgcaccgacgtgcaggatgtcgatgcgctgatcgaggcggtgctgcggttc
ggtgaggcgcgggtgaagtag
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