KEGG   Rhodopseudomonas palustris BisB18: RPC_4873
Entry
RPC_4873          CDS       T00336                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
rpc00300  Lysine biosynthesis
rpc00470  D-Amino acid metabolism
rpc01100  Metabolic pathways
rpc01110  Biosynthesis of secondary metabolites
rpc01120  Microbial metabolism in diverse environments
rpc01230  Biosynthesis of amino acids
Module
rpc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rpc00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    RPC_4873
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RPC_4873
Enzymes [BR:rpc01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     RPC_4873
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: ABD90395
UniProt: Q20WU1
LinkDB
Position
complement(5442417..5443682)
AA seq 421 aa
MHHFDYRNGVLHAEAVNLSSLADAVGTPFYCYSTATLERHYRVFSEAFAGVDALVCYAMK
ANSNQSVLRTLAKLGAGADVVSGGELQRAVAAGIPPQKILFSGVGKTATELRAALAHDIL
CINVESEPELELLSRIASEMGRTARISVRVNPDVDSGSHAKISTGKSENKFGIPISRARE
VYARAAKLPGLKVTGVDMHIGSQITDLAPLEVAFRLLADFVTVLRGDGHTISHVDFGGGL
GIPYFEEPGVPPEPQAYAAMVKRVTHNLGCTLMFEPGRLIVGNAGILVARVTYVKRGDAK
NFVIIDAAMNDLIRPTLYEAYHDILPVQQAAPGSRDIVADVVGPVCESGDYLALDRSMPE
PAPGDLIAIMTAGAYGAVQACTYNTRALVPEVLVKGDNYAVVRPRVDVEQLIALDQPAPW
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgcatcatttcgactatcgcaacggcgtactgcacgccgaggcggtgaacctgtcatcg
ctggcggatgcggtcggcacgccgttctattgttactcgaccgcgacgctggagcggcac
taccgggtgttcagcgaggccttcgcgggcgtcgacgcgctggtgtgctacgcgatgaaa
gccaattccaaccagtcggtgctgcgcacgctggccaagctcggcgccggcgccgacgtg
gtttccggcggcgaactgcagcgcgcggtggccgcgggcatcccgccgcaaaaaattctg
ttctccggcgtcggcaagaccgcgaccgagctgcgcgccgcgcttgcgcacgacatcctg
tgcatcaacgtggagtccgagcccgagctggaattgctgtcgcggatcgccagcgagatg
ggccgcacggcgcggatctcggtgcgggtcaatcccgacgtcgattcgggcagtcacgcc
aaaatctccaccggcaaatccgagaacaagttcggcattccgatcagccgcgcccgcgaa
gtctatgctcgcgccgccaagctgccgggcctcaaggtcaccggcgtcgacatgcatatc
ggcagccagatcaccgatctggcgccgctggaagtcgcgttccggctcttggcggatttc
gtcaccgtgctgcgcggcgacggccacacgatttcgcacgtcgatttcggcggcggcctc
ggcattccctatttcgaggagccaggcgtgccgccggaaccgcaggcctatgccgccatg
gtcaagcgggtgacgcacaatctcggctgcacgctgatgttcgagccgggccggctgatc
gtcggcaatgccggcatcctggtcgcccgcgtcacctacgtgaagcgcggcgacgccaag
aacttcgtcatcatcgatgcggcgatgaacgacctgatccggccgacgctgtacgaggcc
tatcacgacatcctgccggtgcagcaggccgcgccgggatcgcgcgacatcgtcgccgac
gtggtcggcccggtgtgcgagagcggcgactatctggcgctggatcgcagcatgccggag
cctgcgcccggcgatctcatcgcgatcatgaccgccggggcctatggggcggtgcaggcc
tgcacctacaacacccgcgcgctggtgccggaggtgctggtcaagggcgacaactacgcg
gtggtgcggccgcgcgtcgatgtcgagcaactgatcgcgctggaccagccggcgccgtgg
ctgtga

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