Rhodopseudomonas palustris BisB5: RPD_0077
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Entry
RPD_0077 CDS
T00345
Name
(GenBank) succinyldiaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00300
Lysine biosynthesis
rpd01100
Metabolic pathways
rpd01120
Microbial metabolism in diverse environments
rpd01230
Biosynthesis of amino acids
Module
rpd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPD_0077
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpd01002
]
RPD_0077
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RPD_0077
Peptidases and inhibitors [BR:
rpd01002
]
Metallo peptidases
Family M20
RPD_0077
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABE37317
UniProt:
Q13F22
LinkDB
All DBs
Position
92115..93281
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AA seq
388 aa
AA seq
DB search
MTSSRDALSIAQALLRCPSVTPADAGALGVLETLLKDAGFTAHRVTFSEPGAADIDNLYA
RIGDGAPHLCFAGHTDVVPPGDADAWSHGAFSGDVEGGLLYGRGAVDMKGGIACAVAAVL
DHLAAHGGRPKGSISFLITGDEEDVAVNGTVKLLQWAADRGETFDHCIVGEPSNVEAIGD
TIKIGRRGSQSGMLIVDGLQGHVAYPHRASNPIPDIAALITALNDEPLDQGSAQFQPSNL
EFTSVDVGNPATNVIPAQARAKFNIRFNDHHTQDSLKALIEQRLAAACGNRIRARIEWLP
SNADVFVTKPGNFTDLVTASIADVTGRTPDLNTGGGTSDARFIAKYCPVVEFGLVGQTMH
QIDERTPVADLDQLTAIYRGVLERYFKS
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgacatcatcgcgtgacgccctctccatcgctcaagccctgctgcgctgtccgtctgtc
acgccggccgacgccggcgcgctcggtgtgctggagacgctgctgaaggacgccggcttc
accgcgcatcgcgtgaccttcagcgagcccggcgccgccgacatcgacaatctctacgca
cggatcggcgatggcgcgccgcatctgtgctttgccggccataccgacgtggtgccgccg
ggcgacgcagacgcgtggagccacggcgcgttttccggcgatgtcgaaggcggcctgctg
tacggccgcggcgcggtcgacatgaaaggcggcatcgcctgcgcggtcgccgccgtgctc
gatcatctcgccgcccatggcggccggccaaagggatcgatctcgttcctgatcaccggc
gacgaggaagacgtcgccgtcaacggcaccgtcaagctgctgcaatgggcggcggatcgc
ggcgagacattcgatcattgcatcgtcggcgagccgagcaatgtcgaggcgatcggcgac
accatcaagataggccggcgcggctcgcagtccggcatgctgatcgtcgacggactgcag
ggccacgtcgcctatccgcatcgggcctcgaacccgatcccggatatcgcggcgctgatc
accgcgctgaacgacgagccgctggatcagggctcggcgcagtttcagccgtccaatctc
gaattcacctcggtcgatgtcggaaatccggcgactaatgtgatcccggcgcaggcgcgg
gccaaattcaacatccgcttcaacgatcaccacacccaggattcgttgaaggcgctgatc
gagcagcggctggcggcggcgtgcggcaaccgcatccgcgcgcggatcgagtggttgccg
tcgaacgccgacgtgttcgtcaccaagcccggcaatttcaccgatctggtcaccgcatcg
atcgccgacgtgaccggccgcacgcccgatctcaacaccggcggcggcacctcggacgcg
cggttcatcgccaaatactgcccggtggtggagttcggcctggtcggccagaccatgcac
cagatcgacgagcgcacgccggtcgcggatctcgaccagctcaccgcgatctatcgcggc
gtgctggagcgatatttcaagtcataa
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