Rhodopseudomonas palustris BisB5: RPD_0079
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Entry
RPD_0079 CDS
T00345
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpd03016
]
RPD_0079
Enzymes [BR:
rpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RPD_0079
Transfer RNA biogenesis [BR:
rpd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RPD_0079
Prokaryotic type
RPD_0079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ABE37319
UniProt:
Q13F20
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All DBs
Position
complement(94698..95435)
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AA seq
245 aa
AA seq
DB search
MPRYKLTIEYDGAPFCGWQLQPVLPSVQGALEAAALATCGEAVRVHGAGRTDAGVHALGQ
VAHLDIAKPFRADRLRDALNAHVRPYPVAVLSTEIVPDSFEARFSAIRRHYRYRIVNRRS
NLALEIGKVWRVPKPLDTDAMHRAAQVLIGKHDFTTFRDTECQAASPEKTLDVLDVVRSG
DCVDIITSARSYLHSQVRSMVGSLVWVGEGRWSADDLAAALAARRRSACGPVAPPDGLYL
VKVDY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgccccgctacaagctcaccatcgaatatgacggcgctccgttctgcggctggcagttg
cagccggtgctgccgtcggtgcagggcgcgctggaggcggcggcgctggcgacgtgcggc
gaggcggtgcgcgtgcacggcgcgggacgcacggacgccggcgtccatgcgctggggcag
gtcgcccatctcgacattgccaagccgtttcgcgccgaccggctgcgcgacgcgctgaac
gcccatgtgcgaccgtatccggtcgcggtgctgtcgacggagatcgtgccggacagtttc
gaggcgcggttctccgcgatccggcggcactatcgctatcgcatcgtcaaccgccgctcg
aatctcgcgctcgagatcgggaaggtgtggcgggtgccgaagccgctcgacaccgacgcg
atgcatcgcgccgcgcaggtgctgatcggcaagcacgacttcaccaccttccgcgacacc
gaatgccaggcggcctcgccggagaagacgctcgacgtgctcgatgtggtgcgcagcggc
gactgcgtcgacatcatcacctcggcgcgctcttatctacacagccaggtgcgttcgatg
gtcggctcgctggtgtgggtcggcgagggccgctggagcgccgatgatctcgccgctgcg
ctggccgcccgccgccgctccgcctgcggcccggtcgcgccgccggacgggctgtatctg
gtgaaggtggattactaa
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