Rhodopseudomonas palustris BisB5: RPD_0242
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Entry
RPD_0242 CDS
T00345
Name
(GenBank) tRNA-i(6)A37 thiotransferase enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpd03016
]
RPD_0242
Enzymes [BR:
rpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
RPD_0242
Transfer RNA biogenesis [BR:
rpd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
RPD_0242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ABE37482
UniProt:
Q13EK7
LinkDB
All DBs
Position
complement(280703..282124)
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AA seq
473 aa
AA seq
DB search
MAPPRKLHIKSYGCQMNVYDAQRMVDVLAPEGFVETATVDDADLVILNTCHIREKASEKV
YSELGRLRLARDEAASSGRRMQIAVAGCVAQAEGEEIVRRAPVVDVVVGPQSYHHLPQLL
ARADQAGRALETEFPVEDKFGFLPQPRPETIRARGISAFVTVQEGCDKFCTFCVVPYTRG
AEVSRPVSAIIDDVKRLADNGVREITLIGQNVNAYHGEGPDSRAWTLGRLLRRLAAVPGI
VRLRYSTSHPNDVDDELIEAHRDLDALMPFVHLPVQSGSDPILAAMNRKHTAADYRRVID
RFRAVRPQIAFSSDFIVGFPGETEADFAATLALVTQIGYAGAYSFKYSPRPGTPAADMQE
MVPAAVMDERLERLQQLIDSQQSAFNKAAIGQTVDVLFERAGRKPGQIVGRTAYLQPAHV
FPGPMFLGPGMAPDSLVGQILPVRVDSLERYSLLGELAAKPPQHARPLAATGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggccccgccgcgcaagctgcacatcaagtcctatggttgtcagatgaatgtctacgat
gcccagcgcatggtggacgtgctggcgcccgagggctttgtcgagaccgcgacggtggac
gacgccgatctggtgatcctcaacacctgccacattcgcgagaaggcctccgagaaggtg
tattcggagctcggccggctgcgtctggcgcgcgacgaggcggcaagttccggccgccgg
atgcagatcgcggtcgccggctgcgttgcgcaggcggagggcgaggagatcgtccgccgc
gcccccgtggtcgacgtcgtggtcgggccgcagagctatcaccatctgccgcagcttctg
gcgcgcgccgatcaggccggccgcgcgctcgaaaccgaatttccggtcgaggacaaattc
ggcttcctgccgcagccgcggccggaaaccatccgcgcccgcggcatttcggctttcgtc
accgtgcaggagggttgcgacaagttctgcaccttctgcgtggtgccctatacccgcggc
gccgaagtctcgcgcccggtgtcggcgatcatcgacgacgtcaagcgcctcgccgacaac
ggcgtccgcgagatcacgctgatcggccagaacgtcaacgcctatcatggcgaggggccg
gacagccgcgcctggacgctcggccgcctgctgcgccggctcgccgcggtgccgggcatt
gtccggctgcgctattccaccagccatcccaacgacgtcgatgacgaactgatcgaagcg
catcgcgacctcgacgcgctgatgccgttcgtgcatttgccggtgcagtccggatcggac
ccgattctggccgccatgaaccgcaagcacaccgccgccgattatcgccgggtgatcgac
cggttccgcgcggtgcggccgcagatcgccttctcatcggattttatcgttgggttcccg
ggcgagaccgaggcggatttcgccgccaccctcgcactggtcacacaaatcggttacgct
ggcgcatattcgttcaaatattcgccgcggcccggcacgcccgcggcggacatgcaggag
atggtgcccgcagcggtgatggatgagcgtttggagcggctccagcaattgatcgacagt
cagcaatcggccttcaacaaggcggcgatcggccagaccgtggatgtgctgttcgagcgc
gccggccgcaagccgggccagatcgtcggccgcaccgcttatctgcagcccgcccacgtt
tttccaggcccgatgtttctaggtcccgggatggcgcccgacagcctcgtcgggcagatc
ctcccggtccgggtcgacagtctcgagcgttacagcctgctcggcgaactggcggccaag
ccgccgcagcatgctcgtcctttggccgccactggagcctga
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