Rhodopseudomonas palustris BisB5: RPD_0313
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Entry
RPD_0313 CDS
T00345
Name
(GenBank) farnesyl-diphosphate synthase
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00900
Terpenoid backbone biosynthesis
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
RPD_0313
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rpd01006
]
RPD_0313
Enzymes [BR:
rpd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
RPD_0313
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
RPD_0313
Prenyltransferases [BR:
rpd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
RPD_0313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ABE37551
UniProt:
Q13ED8
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All DBs
Position
360822..361787
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AA seq
321 aa
AA seq
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MNGPAEFYLEHFRMATGTSTIDFAKRLDTTAEDTEALLGRLLSDDLLPDEITRPRRLMEA
IRYATLGGGKRLRPFLAVESAAVFGVERASALLVGAALECIHCYSLIHDDLPAMDNSDLR
RGRPTLHKAYDDATAILAGDALLTFAFDIITRDEVHRDPQVRLDLNRVLARCAGLGGMVG
GQILDLAGEGRFGDREPVDVARLQQMKTGALLRYGCVAGAILGEAPPEHYRALDDYGRAL
GEAFQIADDLLDVEGDAAALGKPAGADAALGKTTFVTQLGIDGAKQRVRDLLVRADEALA
PFGAKGDVLRAAARFVAERKS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtccggccgaattttatctggagcacttccgaatggccaccggcacttccacc
atcgacttcgccaaacggctcgacaccaccgccgaggataccgaagccctgctcggacgg
ttgctgtccgacgacttgctgccggacgagatcacccgtccgcgccggttgatggaggcg
atccgctacgcgacgctcggcggcggcaagcggctgcggccgtttctcgcggtggaaagc
gcggcggtcttcggcgtcgagcgcgcctcggcgctgctggtcggcgcggcgctggaatgc
atccattgctattcgctgatccacgacgatctgccggcgatggacaacagcgatctgcgc
cgcgggcggccgaccctgcacaaggcctatgacgacgccaccgcgatcctcgccggcgac
gcgctactgaccttcgcgttcgacatcatcacccgcgacgaagtgcatcgcgatccgcag
gtgcggcttgacctcaaccgggtgctggcgcgctgcgccggcctcggcggcatggtcggc
ggccagatcctcgatctcgccggcgaaggccggttcggcgatcgcgagccggtcgacgtc
gcgcggctgcagcagatgaagaccggagcgctgctgcgctatggctgcgtcgccggcgcg
atcctcggcgaagctccgccggagcattatcgcgcgctcgacgattacggccgcgcgctc
ggcgaggcgttccagatcgccgacgatctgctcgacgtcgagggcgacgccgccgcgctc
ggcaagccggcgggcgccgacgccgcgctcggcaagaccaccttcgtcacccagctcggc
atcgacggcgccaagcagcgggtgcgagatttgctggtgcgcgccgacgaggcgctcgcg
ccgttcggcgccaagggcgacgtactccgcgccgccgcgcgtttcgtcgccgagcgaaaa
agctag
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