Rhodopseudomonas palustris BisB5: RPD_0359
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Entry
RPD_0359 CDS
T00345
Name
(GenBank) ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpd03009
]
RPD_0359
Enzymes [BR:
rpd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RPD_0359
Ribosome biogenesis [BR:
rpd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RPD_0359
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ABE37597
UniProt:
Q13E92
LinkDB
All DBs
Position
424666..425946
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AA seq
426 aa
AA seq
DB search
MVAGGGGGDDARPLRQPQRGLGGDRNASLGAEKLIADGDENRRERQRRGQARDHHHPPHP
RKQRGLFGGRFGQGGFGHAMLGFGSVFLEGSIVNDSSGHLLEVVVAGDEGSPRLDRVLAT
RCPALSRSRLKALILDGRVAIRGAPVRDPAYHAASGETITIDVPPPVAPEPAGEAIALEI
VHEDDDIIVIDKPRGLVVHPAAGHETGTLVNALIAHCGESLSGIGGVRRPGIVHRLDKDT
TGLMVAAKNDRAHQSLSAQFADHGRTGELRRGYYAFVWGAPNRIRGTIDAPIDRHPHARE
KMAVRDGGREAITHWEVLETFTGRSGGEIVSLIACQLETGRTHQIRVHLAHIGHPLLGDD
VYGPHFKTKASQLRPDARAALTDLGRQALHAYLLVLEHPSTGEVVAWESGLPADLKRLKA
ALTATE
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccggcggtggcggtggcgacgacgcgcgcccccttcggcagccgcagcgtggt
ctcggcggcgaccggaacgcttccctcggagcggaaaagcttatagccgatggcgatgag
aaccgccgcgagcgccagcgccgtggtcaggcccgcgatcatcatcatccgccgcacccg
cgcaaacagcgcggcctgttcgggggtcggttcgggcagggcggtttcggtcatgcaatg
ctcggttttggctcggtttttttggaaggctcgatcgtgaacgattcgtcgggacatctg
ctggaagtggtcgttgccggcgacgaggggtcgccgcggctcgaccgggtactggcgacg
cggtgcccggctctgtcgcggtcgcggctgaaggccctgatcctcgacggtcgcgtcgcg
attcgcggcgccccggtccgcgaccccgcttatcacgccgcctcgggggagacgatcaca
atcgacgtgccgccgccggtggcgccggagccggccggcgaggcgatcgcgctcgagatc
gtccacgaggacgacgacatcatcgtcatcgataagccgcgcggcctcgtggtgcatccc
gccgccggccacgagaccggcaccctggtcaacgccttgatcgcgcattgcggcgaatcg
ctgtccgggatcggcggggtgcggcggccggggatcgtccaccggctcgacaaggacacc
accgggctgatggtcgcggcaaagaatgatcgagcccaccaatccttgagcgcgcaattc
gccgaccatggccgcaccggagagctgcgccgcggctattacgcctttgtctggggggcg
ccgaaccgcatccgcggcaccatcgacgcgccgatcgaccggcatccccatgcccgcgaa
aagatggcggtgcgtgacggcggacgcgaggcgatcacccattgggaggtgctggagacc
ttcacgggccgcagcggcggcgagatcgtgtcgctgatcgcctgccagctcgagaccggc
cgcacccaccagatccgggtgcatctcgcccatatcggccacccgctgctcggcgacgac
gtctatggcccgcatttcaaaaccaaggccagccagctccgcccggacgcccgcgccgcg
ctgacggatctgggccggcaggcgctgcatgcctatctgctggtgctcgagcacccctcc
accggggaagtcgtcgcgtgggaatccggcctgccggccgatctgaagcgcctgaaagcc
gccctgacggcgacggaatga
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