Rhodopseudomonas palustris BisB5: RPD_0399
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Entry
RPD_0399 CDS
T00345
Name
(GenBank) Protein of unknown function UPF0011
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpd03009
]
RPD_0399
Enzymes [BR:
rpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
RPD_0399
Ribosome biogenesis [BR:
rpd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RPD_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
ABE37637
UniProt:
Q13E52
LinkDB
All DBs
Position
466232..467185
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AA seq
317 aa
AA seq
DB search
MRAKAAPTIPSTTESEPESRAFLVAGQKLIAPRAAPGLHLVATPIGNLGDITLRALETLA
GVDVIACEDTRITHRLTERYGISAQLKPYHEHNAAQARPKILKKLAQGGSVALVSDAGTP
LISDPGYKLVREAYDAGHDVVALPGASAVLAALALAALPTDRFFFDGFLPAKQGARRSRL
SELAAIDATLVLFEAGSRIHNSLRDLAEVLGGREAAICRELTKLHQEVRRAPLTTLAETA
ETLETRGEFVVVIGPPDPGARMMTQDALDTWLRDALQRDSVKDAVAQAVDISGRPRREIY
ARALELARQREADDGQD
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccaaagctgctcccaccataccgtcaacgaccgaatcggagcctgaatcgcgg
gcctttctggtcgccggtcagaagctgatcgcgccgcgcgccgctcccgggctgcatctg
gtggcgacgccgatcggcaatctcggcgacatcaccttgcgtgcgctggaaacattggcc
ggcgtcgatgtgatcgcctgcgaagacacacgaatcacccatcggctgaccgaacgatac
ggcatttcggcgcagctcaaaccctatcacgaacacaacgccgcgcaggcgcgcccgaag
atcctcaagaagctcgcgcaaggcggctcggtcgcgcttgtctcggacgcgggcacgccg
ctgatttccgaccccggctacaagctggtgcgcgaagcgtacgacgccggacacgatgtc
gtcgcgctgcccggcgcttccgcggtgctggccgcgctggcgctggccgcactgccgacc
gaccgctttttcttcgacggctttctgccggccaaacagggggcacgccgtagccggttg
agcgaactcgccgcgatcgacgcgacgctggtgttgttcgaagcgggaagccggattcat
aacagcctgcgcgatctcgccgaggttctcggcgggcgcgaagccgcgatctgccgcgaa
ctcaccaagctgcatcaggaggtgcgccgcgccccgctgacgacgttggcggagaccgcc
gaaacgctcgaaacccgcggcgagttcgttgtggtgatcggtccgcccgatcccggcgcg
cggatgatgacgcaggatgcgctcgatacctggctgcgcgacgcgctgcagcgcgacagc
gtcaaggacgcggtggcgcaggcggtcgacatctccgggcgtccacgccgcgaaatctac
gcccgcgcgctcgaactggcgcggcagcgcgaggccgacgatggccaagactag
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