Rhodopseudomonas palustris BisB5: RPD_0478
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Entry
RPD_0478 CDS
T00345
Name
(GenBank) succinate dehydrogenase subunit B
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00020
Citrate cycle (TCA cycle)
rpd00190
Oxidative phosphorylation
rpd00650
Butanoate metabolism
rpd00720
Other carbon fixation pathways
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
Module
rpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpd_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RPD_0478
00650 Butanoate metabolism
RPD_0478
09102 Energy metabolism
00190 Oxidative phosphorylation
RPD_0478
00720 Other carbon fixation pathways
RPD_0478
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RPD_0478
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_7
Fer4_9
Fer4_18
Motif
Other DBs
NCBI-ProteinID:
ABE37716
UniProt:
Q13DX3
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All DBs
Position
complement(552188..552970)
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AA seq
260 aa
AA seq
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MVEFALPKNSKIVGGKAWPKPEGATEVREFRVYRWNPDDGNNPSIDTYYVDKHDCGPMVL
DGLIWIKNNIDPTLTFRRSCREGVCGSCAMNIDGENTLACTKAMDDVRGDAVKVTPLPHQ
PVVKDLVPDLTNFYAQYASIQPWLQTVTPTPQKEWRQSHDDREKLDGLYECILCACCSTS
CPSYWWNSDRFLGPAALLQATRWVEDSRDEATGERLDNLEDPFRIYRCHTIMNCAKACPK
GLNPSEAIASLKLKLVERQI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggttgaattcgcacttccgaagaattcgaagattgtcggcggcaaagcctggccgaag
ccggaaggcgcgaccgaagtgcgcgaattccgcgtctatcgctggaatcccgacgacggc
aacaacccgagcatcgacacctattacgtcgacaagcacgattgcggcccgatggttctc
gacggcctgatctggatcaagaacaacatcgatccgacgctaaccttccgccgctcctgc
cgcgaaggcgtctgcggctcctgcgcgatgaacatcgacggcgagaacacgctggcctgc
accaaggcgatggacgacgtccgcggcgacgcggtcaaggttacgccgctgccgcaccag
ccggtggtgaaggatctggtgcccgacctcaccaatttctacgcgcaatacgcctcgatc
cagccctggctgcagaccgtgacgccgacgccgcagaaggaatggcggcagagccacgac
gaccgcgagaagctcgacggcctgtacgaatgcatcctgtgcgcctgctgctcgacctcg
tgccccagctattggtggaattccgaccgcttcctgggaccggcggcgctgctacaggcg
acccgctgggtcgaggacagccgcgacgaggccaccggcgaacggctcgacaatctcgag
gatccgttccggatctatcgctgccacaccatcatgaactgcgccaaggcgtgcccgaag
ggcctcaacccgtcggaagcgatcgccagtctcaagctcaagctggtcgaacgccagatc
tga
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