Rhodopseudomonas palustris BisB5: RPD_0514
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Entry
RPD_0514 CDS
T00345
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00300
Lysine biosynthesis
rpd00470
D-Amino acid metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01230
Biosynthesis of amino acids
Module
rpd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RPD_0514
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RPD_0514
Enzymes [BR:
rpd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RPD_0514
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
HpcH_HpaI
CntK_N
Motif
Other DBs
NCBI-ProteinID:
ABE37752
UniProt:
Q13DT7
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All DBs
Position
586253..587134
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AA seq
293 aa
AA seq
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MSALDNRLFAKMNGIGNEIVVVDLRDQPAPVTPDDARAVAAHLPYDQLMLLQPARLPGTE
AFVRIYNNDGSEAGACGNGMRCVARQMFASTDKQGLTFETRAGLLNCWRGPADGLYTVDM
GEPKFGWKDIPLAEEFRDTRSIELQIGPIDAPLLHTPSVVSMGNPHAIFWVDDIEAHDLG
RFGPLLENHPIFPERANITLAHIVDRDHITMRTWERGAGLTRACGSAACATAVAAARLKR
ADRVVEMTLPGGQLSIAWRESDNHVLMTGGATFEFEGRFDPALFARSRDKTSA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgctggacaatcgcctcttcgccaagatgaacggcatcggcaacgagatcgtc
gtggtcgatctgcgcgatcagccggcgccggtcacgccggacgatgcgcgcgcggtggcg
gcgcatctgccctatgatcagctgatgctgttgcagccggcgcggctgcccggcaccgag
gcgttcgtccggatctacaacaatgacggatccgaagccggcgcctgcggcaacggcatg
cgctgcgtcgcccggcagatgttcgcatcgaccgacaagcagggactgactttcgagacc
cgcgccggtctgctgaattgctggcggggaccggccgacgggctctacactgtcgacatg
ggcgagccgaagttcggctggaaggacattccgctcgccgaggaatttcgcgacacccga
tcgatcgagctgcaaatcgggccgatcgacgcgccgttgctgcacaccccctcggtcgtc
agcatgggcaatccgcacgcgatcttctgggtcgacgacatcgaggcccacgatctcggc
cggttcgggccgctgctggaaaaccatccgatctttccggagcgcgccaacatcacgctc
gcccatatcgtcgatcgcgatcacatcacgatgcggacctgggagcgcggcgcgggactg
acccgggcctgcggctcggccgcctgcgccacggcggtggcggcggcgcggctcaagcgg
gccgatcgcgtcgtcgaaatgacgctgccgggcggccaactcagcatcgcgtggcgcgag
agcgacaatcacgtgctgatgaccggcggcgcgaccttcgagttcgagggccggttcgat
ccggcgctgttcgcccgttcacgcgacaagacctcggcctga
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