Rhodopseudomonas palustris BisB5: RPD_0636
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Entry
RPD_0636 CDS
T00345
Name
(GenBank) hydrogenobyrinic acid a,c-diamide cobaltochelatase
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00860
Porphyrin metabolism
rpd01100
Metabolic pathways
rpd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
RPD_0636
Enzymes [BR:
rpd01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
RPD_0636
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
DUF6324
Motif
Other DBs
NCBI-ProteinID:
ABE37874
UniProt:
Q13DG5
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All DBs
Position
complement(721428..725171)
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AA seq
1247 aa
AA seq
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MRGCAGVRRMHLKLDATASIDDGDVARDLQQAPAEIVVLSAADTDLAAFAAARATLPDDF
PSLRLTNLLALGHPASVDLYVERTLAKARIVILRMLGGEAYWPHGVESLRRDAFARGALF
ACIPGEMQWNADLAARGNVDADDAHSLWRYCTEGGVDNLQLALRYAAWMIMRGDPPPPPR
PMPAAGFWPDEPQKSQRRRALVIFYRALAASGDTAAIDALRLALDARGLDAACLYVTSLK
DARSIAFLRSALAADPPDIIVNATAFATATATDDSGVLASADCPVLQIAQAGISRDSWEQ
SSRGLNPRDLAMHVVLPEVDGRIFAGAVAFKQRGTDETDYAPTIYQPLDDRIAAAADLAQ
AWVRLRRLPRDQRRVGVVLANYPNRDGRLGNGVGLDTPQSLQDLLTALRAEGYLTGDLPA
DTAALMQILQRGPTNALTGRDLRDGGVAWPVADYNGAFATLPDAVRSAVTTRWGQPDADP
HVADGCFRLGLHRFGNVLVGVQPARGYNIDPKSSFHDPDLAPPHHYLAFYLWLRREFDAH
AIVHLGKHGNLEWLPGKSAGLSRDCFPAALLGPLPHLYPFIVNDPGEGIQAKRRSAAVII
DHLTPPMTRAELHDEMARLEALVDEYALAADLDPKRADVIAEDILSLARATRLDADVEID
RSTPTLDALRAIDAHLCDLKEMQIRDGLHVFGRTPQPSQRDDLLVSIARLPRSELKPQDA
SLHRALAQDLGLGEFDPLTRDLAADYTGPRPTVLADLCDRPWRTSGDTVERIELLASRLV
STLHRARPDPLPSWPHTWPVLDWIAASLRPAIDACGDAERNALLRGLDGHFVRPGPSGAP
TRGRPDVLPTGRNFFAVDVRAVPTPSAWRIGALAAERLVEAYWQDAGEWPRAIALSAWGT
ANMRTGGDDVAQALALIGARPTWEDATGRVTGFAIVPLSELQRPRVDVTFRVSGLFRDAF
PVQMDLIASAIAAIAALDEPDDANPIAAHVRTRTDHLIQTGVAPDAAQRQAGLRVFGSKP
GAYGAGLQALIDEGGWETRGDLADAYLAWGGYAYGAGRDGDEARDAFAARLTATQLVAQS
QDNREHDILDSDDYYQFIGGLAATVETLSGAAPKIAHLDTSRPEAPLPRTLAHEIGRVVR
GRAANPKWIAGVMRHGYKGAVEIAATVDYLFGFAASTDAVGSHHFDQLFAAYLDDEQVRD
FLRDANPAAMRETAERFAEAIRRGLWTPRSNHAADLLAELLTRKETA
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtggctgcgccggagtgcgccgcatgcatctgaagctcgacgccaccgccagcatc
gatgacggcgacgtcgcgcgcgatctgcagcaggcgccggccgagatcgtggtgctgtcg
gcggcggacaccgatctcgcggccttcgccgcagcgcgcgcgacgttgccggacgacttt
ccaagcctgcggctgaccaatctgctggcgctcggccatcccgcctcggtcgatctctat
gtcgagcgcacgctcgccaaagccaggatcgtgatcctgcggatgctcggcggcgaggcg
tattggccgcacggcgtcgagagcctgcgccgcgacgcgttcgcgcgcggcgcgctgttc
gcctgcatccccggcgagatgcagtggaacgccgacctcgccgcgcgcggcaatgtcgat
gccgacgatgcgcattcgctgtggcgctattgcaccgaaggcggcgtcgacaatctgcag
ctcgcgctgcgctacgccgcctggatgatcatgcgcggcgacccgccgccgccgccgcgg
ccgatgcccgctgcggggttctggccggacgagccgcaaaagtcgcagcgccgccgcgcg
ctggtgatcttctatcgcgcgctcgccgccagcggcgacaccgccgcgatcgatgcgctc
cgcctggcgctcgacgcccgcggcctcgacgccgcctgcctctacgtcacaagcctgaag
gatgcgcgctcgatcgcgttcctgcgcagcgcgctcgccgccgacccgcccgacatcatc
gtcaacgccaccgccttcgcgaccgcgaccgccaccgacgattccggcgtgctggcctcg
gcggattgcccggtcctgcagatcgcgcaggccggaatcagccgcgacagctgggagcaa
tcgtcccgcggcctcaacccgcgcgacctcgcgatgcatgtcgtgctgcccgaggtcgac
ggccggatcttcgccggcgcggtcgcgttcaagcagcgcggcaccgacgagaccgactac
gcgccgacgatctatcagccgctcgacgaccggatcgctgcggccgccgatctggcgcag
gcctgggtgcggctgcggcggctgccgcgcgaccagcgccgcgtcggcgtcgtgctcgcc
aactatcccaatcgcgacggccggctcggcaacggcgtcggcctcgataccccgcaatcg
ctgcaggatctgctcaccgcgctgcgcgccgagggctacctcaccggcgatctgccggcc
gacaccgcggcgctgatgcaaatcctgcagcgcggtccgaccaatgcgctgaccgggcgc
gatctgcgcgacggcggcgtggcctggccggtcgcggactacaacggcgccttcgcgacg
ctgccggatgcggtgcggtccgccgtcacgacccgctggggccagccggacgccgatccg
catgtcgcggacggctgcttccggctcggcctgcatcgcttcggcaacgtcctggtcggc
gtgcagccggcgcgcggttacaatatcgatccgaaatccagcttccacgatccggacctc
gcgccgccgcatcattatctggcgttctatctgtggctccggcgcgaattcgatgcgcac
gcgatcgtccatctcggcaagcacggcaatctcgaatggctgcccggcaaaagcgccggg
ctgtcgcgcgactgcttccccgccgcattgctcgggccgctgccgcatctgtatccgttc
atcgtcaacgatcccggcgagggcatccaggccaagcgccgcagcgccgcggtgatcatc
gatcatctgacgccgccgatgacccgcgccgaactgcacgacgagatggcgcggctggaa
gcgctggtcgacgaatatgcgcttgcggccgatctcgatcccaaacgcgccgacgtgatc
gccgaagacatcctgtcgctggcgcgcgcgaccaggctcgacgccgacgtcgagatcgac
cgctcgacgccgacgctggacgcgctgcgcgcgatcgacgcgcatctgtgcgatctcaag
gagatgcagatccgcgacgggctgcacgtcttcggccgcacgccgcagccgtcgcagcgc
gacgatctgctggtgtcgatcgcccggctgccgcgctcggagctgaagccgcaggacgcc
tcgctgcatcgcgcgctggcgcaggacctcggcctcggtgaattcgatccgctgacgcgc
gatctcgccgcggactacaccggcccgcgcccgactgttctggccgacctctgcgaccgc
ccctggcgcaccagcggcgacaccgtcgagcgcatcgaattacttgcgtctcgattagtc
tcgacccttcatcgcgcacggcctgaccctctcccttcatggcctcacacttggccggtg
ctcgactggatcgcggcgtcgctgcgtccggcgatcgacgcctgcggcgacgccgagcgc
aatgcgctgctgcgcgggctcgacgggcatttcgtccgccccggaccgtccggcgcgccg
acccgcggccggcccgacgtgctgccgaccgggcgcaatttcttcgcggtcgatgtccgc
gcggtgccgacgccgtcggcgtggcggatcggggcgctcgcagccgaacggctggtcgag
gcctattggcaggacgccggcgaatggccgcgcgcgatcgcgctgtcggcgtggggcacc
gcgaatatgcgcaccggaggcgacgacgtcgcgcaggcgctggcgctgatcggcgcgcgc
ccgacctgggaggacgccaccggccgcgtcaccggctttgcgatcgtgccgctgtcggag
ctgcagcggccgcgcgtcgatgtcaccttccgcgtctccggcctgttccgcgacgccttc
ccggttcaaatggatctgatcgcgagcgcgatcgcggcgatcgccgccctcgacgaaccc
gacgacgccaatccgatcgcagcccatgtccgcacccgcaccgaccatctgatccagacc
ggcgtcgcgccggacgccgcgcagcggcaggcgggccttcgggtgttcggctcgaaaccc
ggcgcctatggcgccgggctgcaggccttgatcgacgaaggcggctgggagacgcgcggc
gatctcgccgacgcctacctcgcctggggcggctacgcctatggcgccggccgcgacggc
gacgaggcccgcgacgcttttgcggcgcggctgacagcaacgcagctggtcgcgcagtcg
caggacaatcgcgagcacgacattctcgactccgatgattactaccagttcatcggcggc
ctcgccgccaccgtcgagacgctgagcggcgccgcgccgaagatcgcccatctcgacacc
tcgcgccccgaggcgccgctgccgcggacgctggcgcacgagatcggccgcgtggtgcgc
ggccgcgccgccaatccgaaatggatcgccggcgtgatgcgccacggctacaagggcgcg
gtcgagatcgccgcgacggtcgactatctgttcggcttcgccgcctcgaccgacgcggtc
ggcagccatcatttcgatcagctgttcgccgcctatctggacgacgagcaggtccgcgac
ttcctgcgcgacgccaatccggcggcgatgcgcgaaaccgccgagcgcttcgccgaagcg
atccggcgtgggctgtggacgccgcgctccaaccacgccgccgatctgctcgccgaactc
ctcacccggaaggaaaccgcatga
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