Rhodopseudomonas palustris BisB5: RPD_0924
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Entry
RPD_0924 CDS
T00345
Name
(GenBank) HhH-GPD
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RPD_0924
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpd03400
]
RPD_0924
Enzymes [BR:
rpd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
RPD_0924
DNA repair and recombination proteins [BR:
rpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
RPD_0924
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABE38162
LinkDB
All DBs
Position
complement(1042762..1043493)
Genome browser
AA seq
243 aa
AA seq
DB search
MDARVKPGHHEHQGCSFTMTIHLDTQADLDAAIATLVKQDKRLRPVLKIAGMPALRRRDP
GFKGLAAIVCGQQLSVASAAAIWGRVGAAFDPFDHAAIKRARTDRLGRLGLSTAKIKTLK
ALARELHAERLNLDVLANQDADVAHATLTALHGIGPWTADIYLLFCLGHGDAWPAGDLAV
QEAMRIGLGLKARPTAKQMAPLAEPWRPLRGAAAHLWWAYYHAVKKREGVIAGKTTKAAK
TEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccgggtcaagcccgggcatcacgaacatcaaggttgcagcttcacgatgacc
atccacctcgacacccaggccgacctcgacgccgcgatcgcgacgctggtgaagcaggac
aagcggctgcggccggtgctgaagatcgccgggatgccggcgctgcggcggcgcgaccct
ggcttcaaggggctggcggcgatcgtctgcggtcagcaattgtcggtggcgagcgcggcg
gcgatctggggtcgggtcggcgcggcgttcgacccgttcgatcatgcggcgatcaagcgc
gcccgcaccgaccggctcggccggctcgggctgtcgacggcgaagatcaaaacgctgaag
gcgctcgccagggagcttcacgccgagcggctcaatctcgatgtgctcgccaatcaggac
gccgacgtcgcccacgccacgctgaccgcgctgcacggcatcgggccgtggaccgcggat
atctatctgctgttctgcctcggccatggcgacgcctggccggccggcgatctcgcggtg
caggaggcgatgcggatcgggctcggcctgaaggcgcggccgaccgccaagcaaatggcg
ccgctggcagaaccctggcgcccgctgcgcggcgccgcggcgcatctgtggtgggcttac
taccacgccgtgaagaaacgcgagggcgtgatcgcggggaagacgacgaaggcggcgaag
acggaggcgtag
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integrated database retrieval system
